BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	1073608 =	171 (0.900)	11 (0.060)	8/152	NT	6.4%	coding (215/483 nt)	purE	N5‑carboxyaminoimidazole ribonucleotide mutase
*	?	USA300TCH1516_ALE	1073634 =	160 (0.880)	11 (0.060)	8/152	NT	6.4%	coding (241/483 nt)	purE	N5‑carboxyaminoimidazole ribonucleotide mutase

Only 100 of 207 total aligned reads displayed.

AAATGATGGTTCAATTTGCTTCTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCTTTATTATCAATTGTTC  >  USA300TCH1516_ALE/1073518‑1073697

tgcaaccggaatacctcctggcatttgaacaattgataagaaagaatctataccctttaaactttttgtttcaatcggcactccaataact                                                                                           >  2:3667867‑M1/91‑91 (MQ=255)

 aaTGATGGTTCAATTTGCTTCTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATg                                                                                          >  1:2981145/1‑91 (MQ=255)

   tgatgGTTCAATTTGCTTCTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGt                                                                                        <  2:2243766/91‑1 (MQ=255)

      tgGTTCAATTTGCTTCTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGc                                                                                     >  2:2007007/1‑91 (MQ=255)

      tgGTTCAATTTGCTTCTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGc                                                                                     >  1:1185113/1‑91 (MQ=255)

      tgGTTCAATTTGCTTCTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGc                                                                                     <  1:1535227/91‑1 (MQ=255)

      tgGTTCAATTTGCTTCTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGc                                                                                     >  1:1581477/1‑91 (MQ=255)

       ggTTCAATTTGCTTCTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGca                                                                                    >  2:499527/1‑91 (MQ=255)

       ggTTCAATTTGCTTCTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGca                                                                                    >  1:1693794/1‑91 (MQ=255)

        gTTCAATTTGCTTCTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGcat                                                                                   >  1:2085731/1‑91 (MQ=255)

         ttCAATTTGCTTCTGAAGCGAGAGAAAGGGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGcatc                                                                                  <  1:821901/91‑1 (MQ=255)

          tCAATTTGCTTCTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGcatca                                                                                 >  1:3271748/1‑91 (MQ=255)

             aTTTGCTTCTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTa                                                                              <  2:917903/91‑1 (MQ=255)

              tttGCTTCTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTaa                                                                             <  1:1979844/91‑1 (MQ=255)

                 gCTTCTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAacga                                                                          >  2:1106931/1‑91 (MQ=255)

                   ttCTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAacgacg                                                                        <  1:1144406/91‑1 (MQ=255)

                    tCTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATGATTAACGACGc                                                                       >  1:3516141/1‑91 (MQ=255)

                     cTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCt                                                                      >  1:1469933/1‑91 (MQ=255)

                      tGAAGCGAGAGAAAGGGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTa                                                                     <  2:3540190/91‑1 (MQ=255)

                      tGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTa                                                                     <  2:2058614/91‑1 (MQ=255)

                      atttgaacaattgataataaagaatctataccctttaaactttttgtttcaatcggcactccaataacTGGTTGCATCATTAACGACGCTa                                                                     >  2:1416742‑M1/69‑91 (MQ=255)

                      atttgaacaattgataataaagaatctataccctttaaactttttgtttcaatcggcactccaataacTGGTTGCATCATTAACGACGCTa                                                                     >  2:1426903‑M1/69‑91 (MQ=255)

                       tttgaacaattgataataaagaatctataccctttaaactttttgtttcaatcggcactccaataacTGGTTGCATCATTAACGACGCTAc                                                                    >  2:1842794‑M1/68‑91 (MQ=255)

                       tttgaacaattgataataaagaatctataccctttaaactttttgtttcaatcggcactccaataacTGGTTGCATCATTAACGACGCTAc                                                                    >  2:2514397‑M1/68‑91 (MQ=255)

                       gAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTAc                                                                    <  2:2157628/91‑1 (MQ=255)

                       gAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTAc                                                                    <  1:179136/91‑1 (MQ=255)

                       gAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTAc                                                                    <  1:2659894/91‑1 (MQ=255)

                        ttgaacaattgataataaagaatctataccctttaaactttttgtttcaatcggcactccaataacTGGTTGCATCATTAACGACGCTAcc                                                                   >  1:3573924‑M1/67‑91 (MQ=255)

                        aaGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTAcc                                                                   <  2:3271748/91‑1 (MQ=255)

                         tgaacaattgataataaagaatctataccctttaaactttttgtttcaatcggcactccaataacTGGTTGCATCATTAACGACGCTACCa                                                                  >  2:263814‑M1/66‑91 (MQ=255)

                         tgaacaattgataataaagaatctataccctttaaactttttgtttcaatcggcactccaataacTGGTTGCATCATTAACGACGCTACCa                                                                  >  1:2121135‑M1/66‑91 (MQ=255)

                         aGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCa                                                                  <  2:1976960/91‑1 (MQ=255)

                           cGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGt                                                                >  1:250600/1‑91 (MQ=255)

                           aacgattgagaataaagaatctataccctttaaactttttgtttcaatcggcactccaataacTGGTTGCATCATTAACGACGCTACCAGt                                                                >  1:3485659‑M1/64‑91 (MQ=255)

                             agagaAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTa                                                              <  1:858886/91‑1 (MQ=255)

                               agaAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTAtt                                                            >  2:3656789/1‑91 (MQ=255)

                               agaAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGACACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTAtt                                                            >  2:2997356/1‑91 (MQ=255)

                                gaAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTg                                                           <  1:269339/91‑1 (MQ=255)

                                gaAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTg                                                           >  1:3283471/1‑91 (MQ=255)

                                gaAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGAGGCACATTTACCAGGTATGGTTGCACCATTAACGACGCTACCAGTTATTg                                                           >  2:3598714/1‑91 (MQ=255)

                                 aaaGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTgg                                                          <  2:850616/91‑1 (MQ=255)

                                 aaaGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTgg                                                          <  1:3745874/91‑1 (MQ=255)

                                 aaaGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTgg                                                          >  2:1382359/1‑91 (MQ=255)

                                   agagGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAg                                                        >  1:2291282/1‑91 (MQ=255)

                                    gagGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGt                                                       <  1:344644/91‑1 (MQ=255)

                                    gagGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGt                                                       <  2:2984683/91‑1 (MQ=255)

                                    gagGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGt                                                       <  1:2149562/91‑1 (MQ=255)

                                    gagGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGt                                                       <  2:2085731/91‑1 (MQ=255)

                                     agGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTg                                                      <  2:245802/91‑1 (MQ=255)

                                       gTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGcc                                                    >  1:1079572/1‑91 (MQ=255)

                                       gTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGcc                                                    >  1:3014767/1‑91 (MQ=255)

                                       gTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGCTGCATCATTAACGACGCTACCAGTTATTGGAGTGcc                                                    >  2:3064742/1‑91 (MQ=255)

                                          taAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGAt                                                 >  2:794127/1‑91 (MQ=255)

                                          taAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGAt                                                 >  2:2323575/1‑91 (MQ=255)

                                          taAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGAt                                                 >  1:2948593/1‑91 (MQ=255)

                                          taAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGAt                                                 >  2:906119/1‑91 (MQ=255)

                                            aaCATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTg                                               >  1:603486/1‑91 (MQ=255)

                                                ttATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAAc                                           >  2:1071474/1‑91 (MQ=255)

                                                  aTCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACaa                                         >  1:3819843/1‑91 (MQ=255)

                                                  aTCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACaa                                         >  1:1617384/1‑91 (MQ=255)

                                                  aTCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACaa                                         >  1:3637968/1‑91 (MQ=255)

                                                   tCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACaaa                                        <  2:710040/91‑1 (MQ=255)

                                                   tCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACaaa                                        >  2:2865412/1‑91 (MQ=255)

                                                    ccctttaaactttttgtttcaatcggcactccaataacTGGTAGCGTCGTTAATGATGCAACCAGTTATTGGAGTGCCGATTGAAACaaaa                                       <  1:1124512‑M1/53‑1 (MQ=255)

                                                      ttGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACaaa                                        <  2:3856104/88‑1 (MQ=255)

                                                      ttGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAg                                     <  1:2410061/91‑1 (MQ=255)

                                                      ttGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAg                                     >  1:59701/1‑91 (MQ=255)

                                                         cAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGttt                                  >  1:2350616/1‑91 (MQ=255)

                                                            gcgcTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTaaa                               <  1:2284246/91‑1 (MQ=255)

                                                             cgcTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAg                              >  1:321940/1‑91 (MQ=255)

                                                              gcTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAgg                             >  1:573793/1‑91 (MQ=255)

                                                              gcTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAgg                             >  2:1750786/1‑91 (MQ=255)

                                                               cTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAggg                            <  1:1106931/91‑1 (MQ=255)

                                                               cTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAggg                            <  1:2569403/91‑1 (MQ=255)

                                                               cTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAggg                            <  2:2928849/91‑1 (MQ=255)

                                                                   cGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGCATGAAACAAACAGTTTAGAGGGtata                        >  2:3366079/1‑91 (MQ=255)

                                                                    ggTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTAACAGTTATTGGAGTGAAGATTGAAAAAAAAAGTTTAAAGGGTATAg                       <  2:157732/91‑1 (MQ=255)

                                                                        cGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTc                   <  2:1823203/91‑1 (MQ=255)

                                                                        cGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTc                   >  2:890554/1‑91 (MQ=255)

                                                                          gCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCtt                 <  1:504332/91‑1 (MQ=255)

                                                                          gCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCtt                 <  1:3217398/91‑1 (MQ=255)

                                                                           cacaTTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCttt                <  1:573235/91‑1 (MQ=255)

                                                                            acaTTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGAAAAAAAAAAAAAAAAGTTTAAAGGGTATAGATTCTtta               <  2:1931809/91‑1 (MQ=255)

                                                                             caTTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCTttat              <  2:1309835/91‑1 (MQ=255)

                                                                             caTTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCTttat              >  1:1279482/1‑91 (MQ=255)

                                                                               tttACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCTttatta            <  2:1288423/91‑1 (MQ=255)

                                                                                ttACCAGGTATTGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCTATTTAAACAAAAAGTTTATTGGGTATAGATTCTTtattat           <  1:1154750/91‑1 (MQ=255)

                                                                                ttACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCTTtattat           <  2:3313294/91‑1 (MQ=255)

                                                                                  aCCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCTTTATTATCa         >  2:2807246/1‑91 (MQ=255)

                                                                                  aCCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCTTTATTATCa         <  1:2299347/91‑1 (MQ=255)

                                                                                   ccAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAGACAAAAAGTTTAAAGGGTATAGATTCTTTATTATCaa        >  2:2406158/1‑91 (MQ=255)

                                                                                   ccAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCTTTATTATCaa        >  2:1365948/1‑91 (MQ=255)

                                                                                   ccAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCTTTATTATCaa        >  1:2303636/1‑91 (MQ=255)

                                                                                      taacTGGTAGCGTCGTTAATGATGCAACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCTTTATTATCAATTg     <  1:3084869‑M1/87‑1 (MQ=255)

                                                                                      ggTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCTTTATTATCAATTg     <  1:669782/91‑1 (MQ=255)

                                                                                      ggTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCTTTATTATCAATTg     <  1:3531733/91‑1 (MQ=255)

                                                                                       gTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCTTTATTATCAAt       >  1:1037031/1‑88 (MQ=255)

                                                                                       gTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCTTTATTATCAATTGt    <  2:555480/91‑1 (MQ=255)

                                                                                       gTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCTTTATTATCAATTGt    >  1:1884966/1‑91 (MQ=255)

                                                                                       gTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCTTTATTATCAATTGt    >  1:3840859/1‑91 (MQ=255)

AAATGATGGTTCAATTTGCTTCTGAAGCGAGAGAAAGAGGTATAAACATTATCATTGCAGGCGCTGGCGGTGCGGCACATTTACCAGGTATGGTTGCATCATTAACGACGCTACCAGTTATTGGAGTGCCGATTGAAACAAAAAGTTTAAAGGGTATAGATTCTTTATTATCAATTGTTC  >  USA300TCH1516_ALE/1073518‑1073697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.