New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? USA300TCH1516_ALE = 1330548182 (0.960)25 (0.140) 13/148 NT 12.4% intergenic (+23/‑124) glpD/USA300HOU_RS06555 Aerobic glycerol‑3‑phosphate dehydrogenase/Monoacylglycerol lipase
?USA300TCH1516_ALE = 1330568 185 (1.050)intergenic (+43/‑104) glpD/USA300HOU_RS06555 Aerobic glycerol‑3‑phosphate dehydrogenase/Monoacylglycerol lipase

Only 100 of 273 total aligned reads displayed.

CTGAAGAAGTTGAGCAAGCAATTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAG  >  USA300TCH1516_ALE/1330458‑1330638
                                                                                          |                                                                                          
 tGAAGAAGTTGAGCAAGCAATTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTgg                                                                                           <  1:3844689/91‑1 (MQ=255)
  gaagaaGTTGAGCAAGCAATTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGgt                                                                                          <  2:2560880/91‑1 (MQ=255)
        ggtGAGAAAGGAATTGAAGACGCTGAACATGGAAGTAATCAAGCAGCAGTTAATGGATACGTAAGTTGTACAGGCATAAACTGGTGTCCTg                                                                                    <  2:719648/89‑1 (MQ=255)
        gTTGAGCAAGCAATTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTg                                                                                    >  1:2439461/1‑91 (MQ=255)
           gAGCAAGCAATTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGatgcccttaaa                                                                                 <  1:3045788‑M1/91‑12 (MQ=255)
           gAGCAAGCAATTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGatgcccttaaa                                                                                 <  2:591530‑M1/91‑12 (MQ=255)
            agcaagcaATTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGtttt                                                                                <  1:2155718/91‑1 (MQ=255)
             gcaagcaaTTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTa                                                                               <  1:102986/91‑1 (MQ=255)
             gcaagcaaTTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTa                                                                               >  1:3210952/1‑91 (MQ=255)
             gcaagcaaTTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTa                                                                               >  2:1269414/1‑91 (MQ=255)
               aagcaaTTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAg                                                                             >  1:180716/1‑91 (MQ=255)
                 gcaaTTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAggg                                                                           <  2:2064751/91‑1 (MQ=255)
                    aTTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCAt                                                                        <  2:1673442/91‑1 (MQ=255)
                    aTTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCAt                                                                        <  2:2540286/91‑1 (MQ=255)
                    aTTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTCTTAAGGGCAt                                                                        >  2:737589/1‑91 (MQ=255)
                    aTTAAAGAAGCGCAACATGGAAAGAATCAACCAGCAGTTAAAGAATAATTAATATGAAAAATAAAAAACTGGTGTCCTGTTTTAAGGGCAt                                                                        <  2:2967114/91‑1 (MQ=255)
                     ttAAAGAAGCGCAACATGGAAATAGTCAACCAGCAGTTAAAGAATAATTATTTTGTACAATCATAAACTGatgcccttaaaacaggacacc                                                                       <  2:3596823‑M1/91‑22 (MQ=255)
                     ttAAAGAAGCGCAACATGGAAATAGTCAACCAGCAGTTAAAGAATAATTATTTTGTACAATCATAAACTGatgcccttaaaacaggacacc                                                                       <  2:3597168‑M1/91‑22 (MQ=255)
                     ttAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGatgcccttaaaacaggacacc                                                                       <  1:1241141‑M1/91‑22 (MQ=255)
                     ttAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATc                                                                       <  2:457947‑M2/91‑2 (MQ=255)
                      tAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGatgcccttaaaacaggacacca                                                                      <  2:3664609‑M1/91‑23 (MQ=255)
                      tAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGatgcccttaaaacaggacacca                                                                      <  1:353050‑M1/91‑23 (MQ=255)
                       aaaGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGatgcccttaaaacaggacaccag                                                                     <  1:1183132‑M1/91‑24 (MQ=255)
                        aagaagCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATcagt                                                                    >  2:38521‑M2/1‑87 (MQ=255)
                         agaagCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATcagtt                                                                   >  1:918065‑M2/1‑86 (MQ=255)
                         agaagCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATcagtt                                                                   <  1:2837348‑M2/91‑6 (MQ=255)
                          gaagCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATcagttt                                                                  <  1:125897‑M2/91‑7 (MQ=255)
                           aagCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGtttt                                                                 <  2:3669133/91‑1 (MQ=255)
                             gcgcAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGtttttt                                                               >  1:3703498/1‑91 (MQ=255)
                             gcgcAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGtttttt                                                               >  1:2559807/1‑91 (MQ=255)
                              cgcAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGttttttt                                                              >  2:2179927/1‑91 (MQ=255)
                                 aaCATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTtata                                                           >  2:1074394/1‑91 (MQ=255)
                                   cATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACg                                                         <  1:3186802/91‑1 (MQ=255)
                                    aTGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACga                                                        >  1:1986847/1‑91 (MQ=255)
                                    aTGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACga                                                        >  1:1123774/1‑91 (MQ=255)
                                    aTGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACga                                                        >  1:2801349/1‑91 (MQ=255)
                                      ggAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACgaga                                                      <  1:3135064/91‑1 (MQ=255)
                                          ataatCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACa                                                  <  2:654846/91‑1 (MQ=255)
                                            aatCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACAtt                                                <  2:2526426/91‑1 (MQ=255)
                                             atCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTa                                               >  2:1741775/1‑91 (MQ=255)
                                             atCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTa                                               <  2:1452192/91‑1 (MQ=255)
                                               cAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGatgcccttaaaacaggacaccagtttatgattgtacaaattaattat                                             <  1:1174648‑M1/91‑48 (MQ=255)
                                                 aCCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGatgcccttaaaacaggacaccagtttatgattgtacaaattaattattc                                           <  1:100324‑M1/91‑50 (MQ=255)
                                                 aCCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCa                                           >  1:3749129/1‑91 (MQ=255)
                                                  ccAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCaa                                          >  1:3466289/1‑91 (MQ=255)
                                                  ccAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTACTCaa                                          >  1:3227629/1‑91 (MQ=255)
                                                   cagcagTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAAt                                         >  2:1468168/1‑91 (MQ=255)
                                                    agcagTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAAtt                                        <  2:2360678/91‑1 (MQ=255)
                                                    agcagTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAAtt                                        <  1:1777186/91‑1 (MQ=255)
                                                     gcagTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTg                                       <  2:2439461/91‑1 (MQ=255)
                                                     gcagTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTg                                       <  2:2634713/91‑1 (MQ=255)
                                                       agTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGaa                                     <  2:1376404/91‑1 (MQ=255)
                                                       agTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGaa                                     <  1:3641868/91‑1 (MQ=255)
                                                        gTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGaaa                                    <  2:1027069/91‑1 (MQ=255)
                                                        gTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGa                                      >  1:150879/1‑89 (MQ=255)
                                                        gTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGa                                      <  2:150879/89‑1 (MQ=255)
                                                         ttAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAAc                                   >  2:2593331/1‑91 (MQ=255)
                                                         ttAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAAc                                   <  1:778363/91‑1 (MQ=255)
                                                           aaaGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTa                                 >  1:2276456/1‑91 (MQ=255)
                                                             aGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATg                               <  1:3404354/91‑1 (MQ=255)
                                                             aGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATg                               <  1:446348/91‑1 (MQ=255)
                                                             aGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATg                               >  1:3579287/1‑91 (MQ=255)
                                                              gAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGc                              >  1:2132930/1‑91 (MQ=255)
                                                              gAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGc                              >  2:1817025/1‑91 (MQ=255)
                                                               aataatTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCa                             <  2:1521694/91‑1 (MQ=255)
                                                                ataatTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCAt                            <  1:2544791/91‑1 (MQ=255)
                                                                  aattaattTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGCAACTAAGCATCa                          >  1:2103125/1‑91 (MQ=255)
                                                                   attaattTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATcagtttatgattgtacaaattaattattctttaactgctggttgatt                         <  1:3739570‑M2/91‑48 (MQ=255)
                                                                    ttaattTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACt                        >  1:2490903/1‑91 (MQ=255)
                                                                     taattTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTa                       >  2:938708/1‑91 (MQ=255)
                                                                     taattTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTa                       <  2:1863496/91‑1 (MQ=255)
                                                                      aattTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTaa                      <  1:546369/91‑1 (MQ=255)
                                                                       attTGTACAATCATAAACTGGTGTCCTGTTTTAATGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTaaa                     >  1:1317041/1‑91 (MQ=255)
                                                                       attTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTNTGCATCACTaaa                     >  1:6/1‑91 (MQ=255)
                                                                        tttGTACAATCAGAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAAt                    >  1:2980448/1‑91 (MQ=255)
                                                                             aCAATCATAAACTGGTGTCCTGTTTTAAGGGCATcagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgt               <  1:2866838‑M2/91‑58 (MQ=255)
                                                                               aaTCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGat             <  2:3164557/91‑1 (MQ=255)
                                                                                 tCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataa           >  1:2670121/1‑91 (MQ=255)
                                                                                  cATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataat          <  2:356420/91‑1 (MQ=255)
                                                                                  cATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataat          <  2:3405328/91‑1 (MQ=255)
                                                                                   aTAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataata         >  1:1426880/1‑91 (MQ=255)
                                                                                    tAAACTGGTGTCCTGTTTTAAGGGCATcagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgttgcgctt        <  1:2922405‑M2/91‑65 (MQ=255)
                                                                                     aaaCTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataataat       <  1:899547/91‑1 (MQ=255)
                                                                                     aaaCTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataataat       <  1:833035/91‑1 (MQ=255)
                                                                                     aaaCTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataataat       >  2:3045648/1‑91 (MQ=255)
                                                                                     aaaCTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataataat       <  2:878268/91‑1 (MQ=255)
                                                                                      aaCTGatgcccttaaaacaggacaccagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgttgcgcttct      <  1:2836949‑M1/91‑87 (MQ=255)
                                                                                      aaCTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataataata      <  2:1939481/91‑1 (MQ=255)
                                                                                       aCTGatgcccttaaaacaggacaccagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgttgcgcttctt     >  2:37427‑M1/1‑4 (MQ=255)
                                                                                       aCTGGTGTCCTGTTTTAAGGGCATcagtttatgattgtacaaattaattattctttaactgctggtcgattatttccatgttgcgcttctt     <  2:3604237‑M2/91‑68 (MQ=255)
                                                                                       aCTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGAtaataataa     >  1:9451/1‑91 (MQ=255)
                                                                                       aCTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGAtaataataa     >  2:1557035/1‑91 (MQ=255)
                                                                                        cTGatgcccttaaaacaggacaccagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgttgcgcttcttt    >  2:3268501‑M1/1‑3 (MQ=255)
                                                                                        cTGatgcccttaaaacaggacaccagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgttgcgcttcttt    >  2:1159322‑M1/1‑3 (MQ=255)
                                                                                        cTGGTGTCCTGTTTTAAGGGCATcagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgttgcgcttcttt    <  1:1183210‑M2/91‑69 (MQ=255)
                                                                                        cTGGTGTCCTGTTTTAAGGGCATcagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgttgcgcttcttt    <  2:264508‑M2/91‑69 (MQ=255)
                                                                                        cTGGTGTCCTGTTTTAAGGGCATcagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgttgcgcttcttt    <  2:1894986‑M2/91‑69 (MQ=255)
                                                                                         tGatgcccttaaaacaggacaccagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgttgcgcttcttta   >  2:3821879‑M1/1‑2 (MQ=255)
                                                                                         tGGTGTCCTGTTTTAAGGGCATcagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgttgcgcttcttta   <  2:1350756‑M2/91‑70 (MQ=255)
                                                                                         tGGTGTCCTGTTTTAAGGGCATcagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgttgcgcttcttta   <  2:236887‑M2/91‑70 (MQ=255)
                                                                                          |                                                                                          
CTGAAGAAGTTGAGCAAGCAATTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAG  >  USA300TCH1516_ALE/1330458‑1330638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.