| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1647574 = | 198 (1.040) | 24 (0.140) | 13/148 | NT | 11.5% | intergenic (+4/+60) | USA300HOU_RS08180/lipM | hypothetical protein/Octanoyltransferase LipM |
| ? | USA300TCH1516_ALE | 1647624 = | 188 (1.070) | intergenic (+54/+10) | USA300HOU_RS08180/lipM | hypothetical protein/Octanoyltransferase LipM | |||||
Only 100 of 322 total aligned reads displayed.
ATTTATTATTTCTTCATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGA > USA300TCH1516_ALE/1647484‑1647664 | aattaacagaagctcaattggcagaagtggaagaattaactgaaaaatatcgttcagatgaatggatgtttagaaagtagtttttagaata < 1:1847844‑M1/1‑1 (MQ=255) attaacagaagctcaattggcagaagtggaagaattaactgaaaaatatcgttcagctgaatggatgtttagaaagtagtttttagaataa < 2:1401117‑M1/2‑1 (MQ=255) attaacagaagctcaattggcagaagtggaagaattaactgaaaaatatcgttcagatgaatggatgtttagaaagtagtttttagaataa < 2:2867370‑M1/2‑1 (MQ=255) attattTCTTCATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAA > 1:464862‑M1/1‑91 (MQ=255) aacagaagctcaattggcagaagtggaagaattaactgaaaaatatcgttcagatgaatggatgtttagaaagtagtttttagaataaaaa < 1:2685022‑M1/5‑1 (MQ=255) attTCTTCATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑Cg < 1:3095285/91‑1 (MQ=255) attTCTTCATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑Cg > 1:3813132/1‑91 (MQ=255) tttCTTCATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑Cgg > 1:2462228/1‑91 (MQ=255) ttcttcATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGa > 2:282829/1‑91 (MQ=255) cttcATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAg < 2:18899/91‑1 (MQ=255) cttcATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAg < 2:2903214/91‑1 (MQ=255) tcATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCa > 2:366207/1‑91 (MQ=255) tcATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCa < 1:2820186/91‑1 (MQ=255) cATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCAc > 2:2593081/1‑91 (MQ=255) cATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCAc > 2:550147/1‑91 (MQ=255) cATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCAc < 2:59147/91‑1 (MQ=255) cATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCAc > 2:308485/1‑91 (MQ=255) tCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAG‑CGGAAGCACtt > 1:3515042/1‑91 (MQ=255) aCTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAgg > 2:2358238/1‑91 (MQ=255) cTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATTGAT‑AAAAAAA‑CGGAAGCACTTGTAGGt > 2:2439100/1‑91 (MQ=255) cTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGt < 2:1511877/91‑1 (MQ=255) tGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTa < 2:1102586/91‑1 (MQ=255) gAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTaa > 1:3573309/1‑91 (MQ=255) aaGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTaaa > 1:1508890/1‑91 (MQ=255) aaGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTaaa > 1:2803567/1‑91 (MQ=255) aGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTaaaa > 1:2416623/1‑91 (MQ=255) aCCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATa < 2:1876577/91‑1 (MQ=255) aCCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATa < 1:3664215/91‑1 (MQ=255) gaattaactgaaaaatatcgttcagatgaatggatgtttagaaagtagtttttagaatAAAAAA‑TGGAAGCACTTGTAGGTAAAATGGTCt > 1:2322974‑M1/59‑91 (MQ=255) cAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAacggaagcacgtagactattttaccaacaag < 2:2738511‑M1/91‑32 (MQ=255) aaTATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTg < 1:549836/91‑1 (MQ=255) atatCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGc < 1:3819729/91‑1 (MQ=255) atatCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGc < 1:2433854/91‑1 (MQ=255) tatCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAG‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCt < 1:1439144/91‑1 (MQ=255) ctgaaaaatatcgttcagatgaatggatgtttagaaagtagtttttagaatAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCt > 2:2563899‑M1/52‑91 (MQ=255) tCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTc > 2:2147551/1‑91 (MQ=255) tCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTc > 2:1748887/1‑91 (MQ=255) gaaaaatatcgttcagatgaatggatgtttagaaagtagtttttagaatAAAAAA‑TGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTc > 1:2936315‑M1/50‑91 (MQ=255) gCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAAcggaagcacgtagactattttacctacaagtgcttccg < 1:2046480‑M1/91‑39 (MQ=255) cAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAAtggaagcacgtagactattttacctacaagtgcttccgt < 1:1749692‑M1/91‑40 (MQ=255) cAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCAt > 2:323793‑M2/1‑90 (MQ=255) cAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCGTCCAt < 2:3578862‑M2/91‑2 (MQ=255) aaaatatcgttcagatgaatggatgtttagaaagtagtttttagaatAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCa > 1:3844999‑M1/48‑91 (MQ=255) aaaatatcgttcagatgaatggatgtttagaaagtagtttttagaatAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCa > 1:2254622‑M1/48‑91 (MQ=255) aaaGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAtggaagcacgtagactattttacctacaagtgcttccgttt < 1:3153924‑M1/91‑42 (MQ=255) aaGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCAttt > 2:423746‑M2/1‑88 (MQ=255) aaGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCAttt < 1:690613‑M2/91‑4 (MQ=255) aGCAAGGCGAAAAAATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGAAAGCACTTGTAGGTAAAATGGTCTCCGTGTTTCCAtttt > 2:383461‑M2/1‑87 (MQ=255) tatcgttcagatgaatggatgtttagaaagtagtttttagaatAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCAttt > 2:1325872‑M1/44‑91 (MQ=255) cAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCAtttttt < 1:1886187‑M2/91‑7 (MQ=255) aaTGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCAtttttta > 2:1470882‑M2/1‑84 (MQ=255) cgttcagatgaatggatgtttagaaagtagtttttagaatAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTa > 2:3617734‑M1/41‑91 (MQ=255) ttcagatgaatggatgtttagaaagtagtttttagaatAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTAt > 1:2607147‑M1/39‑91 (MQ=255) gCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTc > 1:2579766/1‑91 (MQ=255) gTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAtggaagcacgtagactattttacctacaagtgcttccgtttttttatctat < 2:3870128‑M1/91‑52 (MQ=255) gTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTa < 1:286854/91‑1 (MQ=255) aGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTaaaa < 2:1141651/91‑1 (MQ=255) aGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTaaaa < 1:1183688/91‑1 (MQ=255) tataAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAac < 1:1132298/91‑1 (MQ=255) aaaGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAactact > 2:783934/1‑91 (MQ=255) aaGAAATCAAAGAAGAAAATAGAT‑AAAAAAtggaagcacgtagactattttacctacaagtgcttccgtttttttatctattttcttcttt < 1:882399‑M1/91‑62 (MQ=255) aaGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACtt < 2:1650356/91‑1 (MQ=255) aGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACttt < 1:3855201/91‑1 (MQ=255) gAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCAtttttttatctattttcttctttg < 1:2639542‑M2/91‑25 (MQ=255) aTCAAAGAAGAAAATAGAT‑AAAAAAA‑CGG‑AGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTaaa > 2:279868/1‑91 (MQ=255) tCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTaaa < 1:947352/91‑1 (MQ=255) cAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAAc > 2:2038301/1‑91 (MQ=255) cAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAAc > 1:3743634/1‑91 (MQ=255) cAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAAc > 1:1909355/1‑91 (MQ=255) aagaagAAAATAGAT‑ACAAAAA‑CGGAACCACTCGTAGGTAAAATAGTCTACGTGCTCCCACTTTTTATTCTAAAAACTACTTTCTAAACAt > 2:3805504/1‑91 (MQ=255) aagaagAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACAt > 2:3399143/1‑91 (MQ=255) aagaagAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACAt > 1:2918453/1‑91 (MQ=255) aagaagAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACAt < 2:1792646/91‑1 (MQ=255) agaagaAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATc > 2:220984/1‑91 (MQ=255) gaagaaAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATcc > 1:3045855/1‑91 (MQ=255) aagaaAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCa > 1:1961021/1‑91 (MQ=255) agaaAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAactac > 1:3304627/1‑76 (MQ=255) agaaAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAactac < 2:3304627/76‑1 (MQ=255) agaaAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCAt < 1:2156216/91‑1 (MQ=255) gaaAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCAtt > 2:652137/1‑91 (MQ=255) gaaAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCAtt > 1:340261/1‑91 (MQ=255) aaTAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCAt > 1:12761/1‑91 (MQ=255) aaTAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCAt > 2:1061502/1‑91 (MQ=255) aTAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCAttttttatctattttcttctttgatttcttttatacttac < 1:3412890‑M2/91‑41 (MQ=255) tAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCAtttttttatctattttcttctttgatttcttttatacttac < 2:1539059‑M2/91‑42 (MQ=255) tAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCt > 1:1031677/1‑91 (MQ=255) tAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCt > 2:1931336/1‑91 (MQ=255) aGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCa > 2:1458893/1‑49 (MQ=255) aGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCAttttttatctattttcttctttgatttcttttatacttacgc < 2:2664159‑M2/91‑43 (MQ=255) gAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGa > 2:1725372/1‑91 (MQ=255) aT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGaa < 1:1028776/91‑1 (MQ=255) t‑AAAAAAtggaagcacgtagactattttacctacaagtgcttccgtttttttatctattttcttctttgatttcttttatacttacgcatt > 1:1324242‑M1/1‑7 (MQ=255) t‑AAAAAAtggaagcacgtagactattttacctacaagtgcttccgtttttttatctattttcttctttgatttcttttatacttacgcatt > 2:2185618‑M1/1‑7 (MQ=255) t‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAAc < 2:3515042/91‑1 (MQ=255) t‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAAc > 2:3153177/1‑91 (MQ=255) t‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAAc < 2:371805/91‑1 (MQ=255) t‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAAc < 1:1583775/91‑1 (MQ=255) aaaaaatggaagcacgtagactattttacctacaagtgcttccgtttttttatctattttcttctttgatttcttttatacttacgcattg < 1:1733655‑M1/91‑86 (MQ=255) aaaaatggaagcacgtagactattttacctacaagtgcttccgtttttttatctattttcttctttgatttcttttatacttacgcattgc > 2:1803459‑M1/1‑5 (MQ=255) AAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGa < 1:1252273‑M1/91‑1 (MQ=255) | ATTTATTATTTCTTCATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAT‑AAAAAAA‑CGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGA > USA300TCH1516_ALE/1647484‑1647664 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |