| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 1980876 | 132 (0.690) | 17 (0.100) | 8/140 | NT | 13.7% | intergenic (‑118/+61) | USA300HOU_RS09865/USA300HOU_RS09870 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | = 1980902 | 98 (0.590) | intergenic (‑144/+35) | USA300HOU_RS09865/USA300HOU_RS09870 | hypothetical protein/hypothetical protein | |||||
Only 100 of 274 total aligned reads displayed.
TATTCATTATACCACTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTACTAATTCTTCTTTAGCATT > USA300TCH1516_ALE/1980787‑1980966 | aTTCATTATACCACTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGcc < 2:402503/91‑1 (MQ=255) ttCATTATACCACTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCt < 2:141634/91‑1 (MQ=255) aTTATACCACTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCAc > 1:454280/1‑91 (MQ=255) aTTATACCACTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCAc < 2:2155842/91‑1 (MQ=255) aTTATACCACTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCAc < 2:2157519/91‑1 (MQ=255) ttATACCACTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCAcc > 1:725835/1‑91 (MQ=255) ttATACCACTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCAcc < 2:1358905/91‑1 (MQ=255) ttATACCACTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCAcc > 1:1918544/1‑91 (MQ=255) ataCCACTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACctc > 2:1068343/1‑91 (MQ=255) taCCACTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACctct < 2:766702/91‑1 (MQ=255) aCCGCTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCtctc < 1:3008441/91‑1 (MQ=255) aCCACTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCtctc < 2:2938437/91‑1 (MQ=255) aCCACTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCtctc > 2:2388674/1‑91 (MQ=255) aCTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGaa < 2:3626497/91‑1 (MQ=255) aCTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGaa > 1:1909915/1‑91 (MQ=255) cTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGaaa > 1:1671353/1‑91 (MQ=255) cTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGaaa < 2:2296281/91‑1 (MQ=255) ttttatttttTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAgg < 1:82787/91‑1 (MQ=255) ttatttttTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGgtg < 1:2127066/91‑1 (MQ=255) tatttttTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGgtgt > 1:2801582/1‑91 (MQ=255) ttttttAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGgtgtgt > 1:1002394/1‑91 (MQ=255) tttttAATCCATTAATCATTTCACTCTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGtt < 2:3364283/91‑1 (MQ=255) ttAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGtaacacacctgtttcgagaggtgaggca < 1:1881054‑M1/91‑29 (MQ=255) ttAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTAca < 1:2525045‑M2/91‑3 (MQ=255) ttAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATGAGTTTACATACAAAAAGCGATGtaacacacctgtttcgagaggtgaggca < 2:905170‑M1/91‑29 (MQ=255) tAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGtaacacacctgtttcgagaggtgaggcat < 2:3643639‑M1/91‑30 (MQ=255) tAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGtaacacacctgtttcgagaggtgaggcat < 2:3523953‑M1/91‑30 (MQ=255) tAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTAcat < 1:2170451‑M2/91‑4 (MQ=255) aaTTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGtaacacacctgtttcgagaggtgaggcatc < 1:1623101‑M1/91‑31 (MQ=255) aaTTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTAcatc < 1:2643751‑M2/91‑5 (MQ=255) aaTTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTAcatc > 1:1121229‑M2/1‑87 (MQ=255) aaTTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTAcatc < 1:3747494‑M2/91‑5 (MQ=255) aaTTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTAcatc < 1:828265‑M2/91‑5 (MQ=255) aTTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTAcatcg > 1:1766605‑M2/1‑86 (MQ=255) ttCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGtaacacacctgtttcgagaggtgaggcatcgc < 1:2030152‑M1/91‑33 (MQ=255) ttCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGtaacacacctgtttcgagaggtgaggcatcgc < 1:714876‑M1/91‑33 (MQ=255) ttCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTAcatcgc < 2:3221843‑M2/91‑7 (MQ=255) tCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTAcatcgct < 1:1180218‑M2/91‑8 (MQ=255) aTTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTAcatcgcttt > 2:3098197‑M2/1‑82 (MQ=255) ttAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTAcatcgctttt > 1:2689400‑M2/1‑81 (MQ=255) ttAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTAcatcgctttt < 1:2424634‑M2/91‑11 (MQ=255) ttAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTAcatcgctttt > 1:3864654‑M2/1‑81 (MQ=255) tAATCATTTCACTTTCTGCTCAATTTATTATGAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTttta < 2:2739981/91‑1 (MQ=255) aTCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTtttatt > 2:3536232/1‑91 (MQ=255) aTCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTtttatt < 1:173947/91‑1 (MQ=255) tCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGgtgtg < 1:803826/74‑1 (MQ=255) aattagtacatatctaggcctatatacttttaataaataatAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTtttatta > 2:3394741‑M1/42‑91 (MQ=255) cATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACGTCGCTtttattat > 2:1402364/1‑91 (MQ=255) cATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTtttattat > 2:948288/1‑91 (MQ=255) attagtacatatctaggcctatatacttttaataaataatAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTtttattat > 1:1054038‑M1/41‑91 (MQ=255) attagtacatatctaggcctatatacttttaataaataatAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTtttattat > 1:1376674‑M1/41‑91 (MQ=255) aaTTTCACTTTCTGCTCAATTTATTGTTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTtttattat < 1:1149900/90‑1 (MQ=255) ttagtacatatctaggcctatatacttttaataaataatAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTtttattatt > 1:494397‑M1/40‑91 (MQ=255) aTTTCTCTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTtttattatt < 2:3568729/91‑1 (MQ=255) tttCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTtttattattt < 2:1495836/91‑1 (MQ=255) tttCACTTTCTGCTCAATTTATTATTAGACTACATACAAAAAGCGATGCCTCACCTCTCGACACAGGCGTGTTACATCACTtttattactt > 2:1994674/1‑91 (MQ=255) cACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTtttattatttatt < 2:800991/91‑1 (MQ=255) aCTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTtttattatttatta < 2:1643403/91‑1 (MQ=255) cTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTaa < 1:3822625/91‑1 (MQ=255) tCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAg > 2:2687200/1‑91 (MQ=255) tCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAg < 2:1808321/91‑1 (MQ=255) tGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGta < 1:972738/91‑1 (MQ=255) cTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGtatt > 2:1538137/1‑90 (MQ=255) tCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGtatat < 2:2090621/91‑1 (MQ=255) tattattaGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCt > 2:2197118/1‑91 (MQ=255) tatacttttaataaataatAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCt > 1:3704730‑M1/20‑91 (MQ=255) attattaGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTa > 1:3460647/1‑91 (MQ=255) ttattaGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAg > 2:3138649/1‑91 (MQ=255) taGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGttat > 2:3432173/1‑91 (MQ=255) taGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGatat > 1:3193331/1‑91 (MQ=255) ttACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTAc < 2:1607575/91‑1 (MQ=255) tacatacaAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTACt < 1:1247842/91‑1 (MQ=255) acaAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTACTAAttc > 1:3624575/1‑91 (MQ=255) caAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTAcatcgctttttgtatgtaaactaataataaattgagcagaaagtgaaatgatt < 1:2590687‑M2/91‑54 (MQ=255) caAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTAcatcgctttttgtatgtaaactaataataaattgagcagaaagtgaaatgatt < 1:2590665‑M2/91‑54 (MQ=255) aaaaaGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTACTAAttctt > 1:2011570/1‑91 (MQ=255) aaaaGCGATGtaacacacctgtttcgagaggtgaggcatcgctttttgtatgtaaactaataataaattgagcagaaagtgaaatgattaa < 2:1454424‑M1/91‑82 (MQ=255) aaaGCGATGtaacacacctgtttcgagaggtgaggcatcgctttttgtatgtaaactaataataaattgagcagaaagtgaaatgattaat > 2:3098514‑M1/1‑9 (MQ=255) AAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTACTAATtcttct > 1:3117827‑M1/1‑91 (MQ=255) aGCGATGtaacacacctgtttcgagaggtgaggcatcgctttttgtatgtaaactaataataaattgagcagaaagtgaaatgattaatga > 2:1053821‑M1/1‑7 (MQ=255) aGCGATGCCTCACCTCTCGAAACAGGTGTGTTAcatcgctttttgtatgtaaactaataataaattgagcagaaagtgaaatgattaatga < 2:3309083‑M2/91‑59 (MQ=255) AGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTACTAATTCTTCttt > 2:3188716‑M1/1‑91 (MQ=255) AGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTACTAATTCTTCttt < 2:3683069‑M1/91‑1 (MQ=255) gCGATGCCTCACCTCTCGAAATAGGTGTGTTAcatcgctttttgtatgtaaactaataataaattgagcagaaagtgaaatgattaatgaa < 2:1571432‑M2/91‑60 (MQ=255) gCGATGCCTCACCTCTCGAAACAGGTGTGTTAcatcgctttttgtatgtaaactaataataaattgagcagaaagtgaaatgattaatgaa < 1:2030597‑M2/91‑60 (MQ=255) gCGATGCCTCACCTCTCGAAACAGGTGTGTTAcatcgctttttgtatgtaaactaataataaattgagcagaaagtgaaatgattaatgaa < 1:2030487‑M2/91‑60 (MQ=255) GCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTACTAATTCTTCTTTa > 1:152878‑M1/1‑91 (MQ=255) GCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTACTAATTCTTCTTTa < 1:2280350‑M1/91‑1 (MQ=255) cGATGtaacacacctgtttcgagaggtgaggcatcgctttttgtatgtaaactaataataaattgagcagaaagtgaaatgattaatgaat > 1:1766356‑M1/1‑5 (MQ=255) cGATGCCTCACCTCTCGAAACAGGTGTGTTAcatcgctttttgtatgtaaactaataataaattgagcagaaagtgaaatgattaatgaat < 1:3658843‑M2/91‑61 (MQ=255) gATGtaacacacctgtttcgagaggtgaggcatcgctttttgtatgtaaactaataataaattgagcagaaagtgaaatgattaatgaatt > 2:2036168‑M1/1‑4 (MQ=255) gATGtaacacacctgtttcgagaggtgaggcatcgctttttgtatgtaaactaataataaattgagcagaaagtgaaatgattaatgaatt < 1:2643566‑M1/91‑88 (MQ=255) GATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTACTAATTCTTCTTTAGc < 1:1429635‑M1/91‑1 (MQ=255) GATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTACTAATTCTTCTTTAGc < 2:2617103‑M1/91‑1 (MQ=255) GATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTACTAATTCTTCTTTAGc < 1:524742‑M1/91‑1 (MQ=255) aTGtaacacacctgtttcgagaggtgaggcatcgctttttgtatgtaaactaataataaattgagcagaaagtgaaatgattaatgaattc > 2:3855417‑M1/1‑3 (MQ=255) ATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTACTAATTCTTCTTTAGCa < 2:252494‑M1/91‑1 (MQ=255) ATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTACTAATTCTTCTTTAGCa < 2:1224203‑M1/91‑1 (MQ=255) GCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTACTAATTCTTCTTTAGCAtt < 1:3586329‑M1/91‑1 (MQ=255) GCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTACTAATTCTTCTTTAGCAtt < 1:339692‑M1/91‑1 (MQ=255) | TATTCATTATACCACTATTTTTATTTTTTAATTCATTAATCATTTCACTTTCTGCTCAATTTATTATTAGTTTACATACAAAAAGCGATGCCTCACCTCTCGAAACAGGTGTGTTACATCGCTTTTATTATTTATTAAAAGTATATAGGCCTAGATATGTACTAATTCTTCTTTAGCATT > USA300TCH1516_ALE/1980787‑1980966 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |