| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2444885 | 173 (0.910) | 23 (0.140) | 14/140 | NT | 12.4% | intergenic (‑38/+187) | mleN_2/USA300HOU_RS12595 | Malate‑2H(+)/Na(+)‑lactate antiporter/hypothetical protein |
| ? | USA300TCH1516_ALE | = 2444897 | 174 (1.050) | intergenic (‑50/+175) | mleN_2/USA300HOU_RS12595 | Malate‑2H(+)/Na(+)‑lactate antiporter/hypothetical protein | |||||
Only 100 of 310 total aligned reads displayed.
AATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTG > USA300TCH1516_ALE/2444795‑2444975 | aataaCAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTcac > 2:1090566/1‑91 (MQ=255) ataaCAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTtcat < 1:728761‑M1/91‑5 (MQ=255) taaCAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACaa > 1:3469862/1‑91 (MQ=255) taaCAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACaa > 2:2549438/1‑91 (MQ=255) aaCAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACaaa > 2:594416/1‑91 (MQ=255) aaCAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACaaa > 2:1210663/1‑91 (MQ=255) aCAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAAc > 2:2226881/1‑91 (MQ=255) aCAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAAc > 2:1243239/1‑91 (MQ=255) aGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGAt < 2:825154/91‑1 (MQ=255) gggAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATga > 1:866182/1‑91 (MQ=255) gggAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATga > 1:601630/1‑91 (MQ=255) gAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAag < 2:1492877‑M2/91‑3 (MQ=255) ataatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTtcatcgtttgtgagaa < 2:1682630‑M1/91‑17 (MQ=255) taatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTtcatcgtttgtgagaaa < 1:1841158‑M1/91‑18 (MQ=255) taatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaa > 1:94748‑M2/1‑86 (MQ=255) taatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaa > 1:2899407‑M2/1‑86 (MQ=255) taatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaa < 1:363869‑M2/91‑6 (MQ=255) taatGCCCAAGCAGTGCTCTTTTTATGTACTTCCATCCTTTTTGCCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaa > 1:3878649‑M2/1‑86 (MQ=255) aatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTtcatcgtttgtgagaaag < 2:1890708‑M1/91‑19 (MQ=255) aatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTtcatcgtttgtgagaaag < 1:1015338‑M1/91‑19 (MQ=255) aatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTtcatcgtttgtgagaaag < 2:1980655‑M1/91‑19 (MQ=255) aatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaag < 2:2407222‑M2/91‑7 (MQ=255) atGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTtcatcgtttgtgagaaaga < 2:781077‑M1/91‑20 (MQ=255) atGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaaga < 1:812459‑M2/91‑8 (MQ=255) atGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaaga < 2:1259952‑M2/91‑8 (MQ=255) gCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTtcatcgtttgtgagaaagagg < 2:3866756‑M1/91‑22 (MQ=255) cccAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTtcatcgtttgtgagaaagaggt < 1:3399492‑M1/91‑23 (MQ=255) ccAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTtcatcgtttgtgagaaagaggta < 1:3724611‑M1/91‑24 (MQ=255) cgagcATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTtcatcgtttgtgagaaagaggtat < 2:275669‑M1/89‑25 (MQ=255) aGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTc > 1:1309141/1‑91 (MQ=255) aGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTc > 1:980471/1‑91 (MQ=255) cATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAt < 2:1452727/91‑1 (MQ=255) cATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAt < 1:2516828/91‑1 (MQ=255) aTTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAtg < 1:2049677/91‑1 (MQ=255) ttGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAtgt < 2:537055/91‑1 (MQ=255) tGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAtgtg < 2:2085752/91‑1 (MQ=255) gCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGc < 2:3250567/91‑1 (MQ=255) gCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGc > 1:2478856/1‑91 (MQ=255) tctTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCtt < 1:3031838/91‑1 (MQ=255) ctTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCttt > 2:1642736/1‑91 (MQ=255) tttttATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTa < 1:3530840/91‑1 (MQ=255) ttttATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTAc < 2:23465/91‑1 (MQ=255) tttATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTAcc < 2:2866807/91‑1 (MQ=255) ttATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCt > 1:404813/1‑91 (MQ=255) tATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTg < 2:2369453/91‑1 (MQ=255) tGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCt > 1:2596991/1‑91 (MQ=255) tGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCt < 1:3118947/91‑1 (MQ=255) tACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTa < 2:3158464/91‑1 (MQ=255) aCTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTAt > 2:678024/1‑91 (MQ=255) cTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATc < 2:3629683/91‑1 (MQ=255) ttCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTtcatcgtttgtgagaaagaggtatttttaattggaaagcaggtaaaa < 1:2838418‑M1/91‑48 (MQ=255) ttCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCt > 1:2211963/1‑91 (MQ=255) ccATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTc > 1:1120935/1‑91 (MQ=255) aTCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCaa > 2:3330953/1‑91 (MQ=255) cTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAAcc < 1:1172048/91‑1 (MQ=255) ttttACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCAt < 1:1764988/91‑1 (MQ=255) ttACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTa > 1:2835750/1‑91 (MQ=255) ttACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTa > 1:754296/1‑91 (MQ=255) ttACATGCTATAAAATGAAAAATACCTCTATCGCACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagt > 2:3572592‑M2/1‑45 (MQ=255) ccTGCTTTCCAATTAATAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACgg < 2:2976083/91‑1 (MQ=255) cTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGt < 2:3750599/91‑1 (MQ=255) tGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGtt < 2:3805468/91‑1 (MQ=255) cTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTAc < 1:2350596/91‑1 (MQ=255) cTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTAc < 1:3756282/91‑1 (MQ=255) cTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAACAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTAc > 2:2993978/1‑91 (MQ=255) tttCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACt < 1:1607385/91‑1 (MQ=255) cAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGaa > 1:789266/1‑91 (MQ=255) cAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGaa > 2:805906/1‑91 (MQ=255) aaTTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAAt < 1:2407222/91‑1 (MQ=255) aTTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAAtt > 1:3850507/1‑91 (MQ=255) aTTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAAtt < 2:2896418/91‑1 (MQ=255) ttAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTg < 2:3442175/91‑1 (MQ=255) ttAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTg > 1:89610/1‑91 (MQ=255) ttAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTg > 2:3078116/1‑91 (MQ=255) tAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTgg < 2:2973115/91‑1 (MQ=255) tAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTgg > 1:2235662/1‑91 (MQ=255) aaaaaTACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGc < 2:643955/91‑1 (MQ=255) aaaTACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGcac < 2:441047/91‑1 (MQ=255) aaaTACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGcac < 2:1398192/91‑1 (MQ=255) aTACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACAt < 1:236015/91‑1 (MQ=255) aCCTCTTTCTCACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttggg < 1:3535695‑M2/91‑70 (MQ=255) ccTCTTTCTtcatcgtttgtgagaaagaggtatttttaatcggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggc < 2:2399514‑M1/91‑83 (MQ=255) ccTCTTTCTCACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggc < 2:3866889‑M2/91‑71 (MQ=255) ctctTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCga < 2:2570465/91‑1 (MQ=255) tctttcttcatcgtttgtgagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcat < 2:1618614‑M1/91‑85 (MQ=255) tctttcttcatcgtttgtgagaaagaggtatttttaattgcaaagcaggtaaaaaggatggaagtagataaaaagagcaatgcttgggcat > 2:3604643‑M1/1‑7 (MQ=255) tctTTCTCACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcat < 1:991598‑M2/91‑73 (MQ=255) ctTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCgaga > 1:1970886/1‑91 (MQ=255) tttcttcatcgtttgtgagaaagaggtattttttttttttttttaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcatta > 2:3668179‑M1/1‑5 (MQ=255) tttcttcatcgtttgtgagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcatta > 1:2649574‑M1/1‑5 (MQ=255) tttCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGAt > 2:527893/1‑91 (MQ=255) ttcttcatcgtttgtgagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattat < 2:377471‑M1/91‑88 (MQ=255) ttCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATg < 1:3628567/91‑1 (MQ=255) tctcGCAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattatt < 2:766439‑M2/91‑77 (MQ=255) tctcACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattatt < 1:1068048‑M2/91‑77 (MQ=255) tctcACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGt < 1:316606/91‑1 (MQ=255) cttcatcgtttgtgagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattattc > 2:3153917‑M1/1‑2 (MQ=255) ctcACAAACGATGAGGAAAGAGGGGTTCATGTGCTTTACCTGCATATCTTTAAAGCATTACGGTTACTGGAATTGGCACATTCTAGATGtt < 2:3607443/91‑1 (MQ=255) ctcACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGtt < 1:2874658/91‑1 (MQ=255) ttcatcgtttgtgagaaagaggtatgtttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattattcc < 2:3551936‑M1/91‑91 (MQ=255) | AATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTG > USA300TCH1516_ALE/2444795‑2444975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |