| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2444885 | 173 (0.910) | 23 (0.140) | 14/140 | NT | 12.4% | intergenic (‑38/+187) | mleN_2/USA300HOU_RS12595 | Malate‑2H(+)/Na(+)‑lactate antiporter/hypothetical protein |
| ? | USA300TCH1516_ALE | = 2444897 | 174 (1.050) | intergenic (‑50/+175) | mleN_2/USA300HOU_RS12595 | Malate‑2H(+)/Na(+)‑lactate antiporter/hypothetical protein | |||||
Only 100 of 256 total aligned reads displayed.
GGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAGGCTTCAT > USA300TCH1516_ALE/2444807‑2444987 | ataatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaa < 2:377471‑M2/91‑5 (MQ=255) taatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaa > 2:363869‑M2/1‑86 (MQ=255) taatGCCCAAGCAGTGCTCTTTTTATGTACTTCCATCCTTTTTGCCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaa > 1:3878649‑M2/1‑86 (MQ=255) aatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaag < 2:2974149‑M2/91‑7 (MQ=255) aatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaag < 2:2407222‑M2/91‑7 (MQ=255) aatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaag < 1:1775207‑M2/91‑7 (MQ=255) atGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaaga > 1:1622328‑M2/1‑84 (MQ=255) atGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaaga < 1:812459‑M2/91‑8 (MQ=255) atGCCCAAGCATTGCTCTTTTTATCTACTTCCATCCTTTTTACCTGCTTTGCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaaga > 2:3604643‑M2/1‑84 (MQ=255) tGCCCAAACATTGCTCTTTTTATGTACTTCCATCCTGTTTCCCTGCTATCCAATTAAAAATACCTCTCTCTCACAACCGATGAagaaagag < 2:3611795‑M2/91‑9 (MQ=255) ttgggCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGtt > 1:2354335/5‑91 (MQ=255) ccAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGtt > 1:291764/1‑91 (MQ=255) gggCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGtttt > 2:2186120/3‑91 (MQ=255) cATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAt < 2:1854209/91‑1 (MQ=255) cATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAt < 2:1471644/91‑1 (MQ=255) aTTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAtg < 1:2049677/91‑1 (MQ=255) tGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAtgtg < 2:1039383/91‑1 (MQ=255) tGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAtgtg < 2:2085752/91‑1 (MQ=255) gCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGc < 2:3250567/91‑1 (MQ=255) gCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGc < 2:1968249/91‑1 (MQ=255) gCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGc < 2:3023860/91‑1 (MQ=255) tctTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCtt > 1:3577110/1‑91 (MQ=255) ctTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCttt > 2:1642736/1‑91 (MQ=255) tttttATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTa < 2:3506898/91‑1 (MQ=255) tttttATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTa < 1:3530841/91‑1 (MQ=255) ttttATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTAc < 2:23465/91‑1 (MQ=255) tttATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGCAGAAAGAGGTTTTCATGTGCTTTAcc > 1:3670213/1‑91 (MQ=255) tttATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTAcc < 2:2866807/91‑1 (MQ=255) ttATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCt > 1:404813/1‑91 (MQ=255) tATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTg > 1:2837784/1‑91 (MQ=255) tATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTg < 2:2369453/91‑1 (MQ=255) tGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCt > 1:3725842/1‑91 (MQ=255) tGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCt > 1:2596991/1‑91 (MQ=255) tGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCt < 1:3118947/91‑1 (MQ=255) aCTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTAt > 2:678024/1‑91 (MQ=255) aCTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTAt > 1:647042/1‑91 (MQ=255) ttCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCt > 1:2212894/1‑91 (MQ=255) cATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCa < 1:2584706/91‑1 (MQ=255) aTCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCaa < 1:923086/91‑1 (MQ=255) aTCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCaa > 2:3330953/1‑91 (MQ=255) tCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCaaa < 2:3156067/91‑1 (MQ=255) tCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCaaa > 2:1227144/1‑91 (MQ=255) tCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCaaa > 1:786734/1‑91 (MQ=255) ccTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAtgt > 2:3562954/1‑68 (MQ=255) ccTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAAc > 1:971166/1‑91 (MQ=255) cTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGc > 2:2905464/1‑69 (MQ=255) cTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAAcc < 1:1172048/91‑1 (MQ=255) ttACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTa > 1:754296/1‑91 (MQ=255) tACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTAc > 2:1505834/1‑91 (MQ=255) tACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTAc > 2:3853899/1‑91 (MQ=255) ccTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACgg > 2:864372/1‑91 (MQ=255) cTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGt < 2:3750599/91‑1 (MQ=255) tGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGtt < 2:800272/91‑1 (MQ=255) cTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTAc < 1:2350596/91‑1 (MQ=255) tttCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACt < 2:1287387/91‑1 (MQ=255) cAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGaa > 1:863990/1‑91 (MQ=255) aaTTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAAt < 1:352921/91‑1 (MQ=255) aTTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAAtt < 2:2896418/91‑1 (MQ=255) aTTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAAtt > 1:3850507/1‑91 (MQ=255) ttAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTg > 1:89503/1‑91 (MQ=255) ttAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTg > 2:3078142/1‑91 (MQ=255) tAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTGCGGTTACTGGAATTgg > 2:2983411/1‑91 (MQ=255) tAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTgg > 1:2235662/1‑91 (MQ=255) tAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTgg < 1:2468122/91‑1 (MQ=255) aaaaaTACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGc > 1:2842335/1‑91 (MQ=255) aaaaaTACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGc < 2:643955/91‑1 (MQ=255) aaaTACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGcac < 1:2390004/91‑1 (MQ=255) aaaTACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGcac < 2:441047/91‑1 (MQ=255) aTACCTCTTTCTCACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgctcg < 2:275669‑M2/91‑68 (MQ=255) tACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACAtt > 2:2467503/1‑91 (MQ=255) aCCTCTTTCTCACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttggg < 1:3399492‑M2/91‑70 (MQ=255) ccTCTTTCTCACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggc < 2:3866889‑M2/91‑71 (MQ=255) ccTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCg < 2:529981/91‑1 (MQ=255) ccTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCg > 1:2498479/1‑91 (MQ=255) ccTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCg < 1:376751/91‑1 (MQ=255) ctctTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCga < 2:2570465/91‑1 (MQ=255) ctctTTCGCACAAGCGATGAAGAAAGAGGTTTTCATGTGCTTTACCGGCTTATCTTCAAGCCATTACGGTTACTGGAATTGGCACATTCga < 2:728429/91‑1 (MQ=255) tctTTCTCACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcat < 1:991598‑M2/91‑73 (MQ=255) ctTTCTCACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcatt < 1:1015338‑M2/91‑74 (MQ=255) ctTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCgaga < 2:337509/91‑1 (MQ=255) ctTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCgaga > 1:1970812/1‑91 (MQ=255) ttCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATg < 1:3628567/91‑1 (MQ=255) tctcACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattatt < 1:1068048‑M2/91‑77 (MQ=255) tctcACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattatt < 2:766586‑M2/91‑77 (MQ=255) tctcACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGt < 1:316606/91‑1 (MQ=255) ctcACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGtt < 1:2874658/91‑1 (MQ=255) ctcACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGtt < 2:51924/91‑1 (MQ=255) tcACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTg < 1:1556449/91‑1 (MQ=255) cacaAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattattccc < 1:1138147‑M2/91‑80 (MQ=255) acaAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGcc < 2:61951/91‑1 (MQ=255) aaCGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAg < 1:2674808/91‑1 (MQ=255) gATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAGGCt < 1:1403478/91‑1 (MQ=255) gATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAGGCt < 2:1261336/91‑1 (MQ=255) aTGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattattccccttgttat < 1:728761‑M2/91‑88 (MQ=255) aTGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAGGCtt < 1:581143/91‑1 (MQ=255) aTGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAGGCtt > 1:208399/1‑91 (MQ=255) gaagaaAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAGGCTTCa > 2:3228233/1‑91 (MQ=255) aagaaagaGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTATTGGAATTGGCACATTCGAGATGTTGCCGAGGCTTCAt < 1:3279538/91‑1 (MQ=255) aagaaagaGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAGGCTTCAt < 1:552902/91‑1 (MQ=255) aagaaagaGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAGGCTTCAt < 2:12079/91‑1 (MQ=255) | GGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAGGCTTCAT > USA300TCH1516_ALE/2444807‑2444987 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |