| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2455747 = | 166 (0.870) | 10 (0.060) | 5/132 | NT | 7.2% | intergenic (+5/+61) | lyrA/rpiA | Lysostaphin resistance protein A/Ribose‑5‑phosphate isomerase A |
| ? | USA300TCH1516_ALE | 2455795 = | 121 (0.770) | intergenic (+53/+13) | lyrA/rpiA | Lysostaphin resistance protein A/Ribose‑5‑phosphate isomerase A | |||||
Only 100 of 238 total aligned reads displayed.
AAAGAAGACAGACGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAACACCCTCTTG > USA300TCH1516_ALE/2455656‑2455837 | aaaGAAGACAGACGTTCATCAGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACa > 1:3765062/1‑91 (MQ=255) agacaggatacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaa < 2:1610428‑M1/1‑1 (MQ=255) agacaggatacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaa < 1:1268714‑M1/1‑1 (MQ=255) agacaggatacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaa < 1:1349292‑M1/1‑1 (MQ=255) agacaggatacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaa > 1:1508058‑M1/91‑91 (MQ=255) agacaggatacttcttagatatggcagatcaagttattgtaggcacccaagagggtgttaaaattttagaaaaataatatatagtatagaa < 1:3081152‑M1/1‑1 (MQ=255) aagaagACAGACGTTCATCAGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACaa < 1:2846453/91‑1 (MQ=255) aagaagACAGACGTTCATCAGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACaa < 2:2808104/91‑1 (MQ=255) aagaagACAGACGTTCATCAGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACaa < 1:3322671/91‑1 (MQ=255) gacaggatacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaaa > 2:2564266‑M1/90‑91 (MQ=255) gacaggatacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaaa < 1:2180707‑M1/2‑1 (MQ=255) agaagaCAGACGTTCATCAGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACaaa > 1:334809/1‑91 (MQ=255) gaagaCAGACGTTCATCAGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAg > 1:2249130/1‑91 (MQ=255) caggatacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAg < 2:690598‑M1/4‑1 (MQ=255) aggatacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAgc > 2:2181078‑M1/87‑91 (MQ=255) ggatacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAgcg > 2:295781‑M1/86‑91 (MQ=255) acagacGTTCATCAGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCt > 1:2009985/1‑91 (MQ=255) cagacGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCt < 1:3143785/91‑1 (MQ=255) tacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAGCGCtt > 2:2262334‑M1/83‑91 (MQ=255) gacGTTCATCAGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGc < 2:2910645/91‑1 (MQ=255) acttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAGCGCTTg > 2:596492‑M1/82‑91 (MQ=255) cttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAGCGCTTGc < 2:3178022‑M1/11‑1 (MQ=255) acGTTCATCAGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCt > 1:3404425/1‑91 (MQ=255) ttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAGCGCTTGCt < 1:104646‑M1/12‑1 (MQ=255) gTTCATCAGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAg < 1:3160506/91‑1 (MQ=255) gTTCATCAGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAg < 1:516497/91‑1 (MQ=255) cttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAGCGCTTGCTAg < 2:3292946‑M1/14‑1 (MQ=255) catcaGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTa > 1:1744405/1‑87 (MQ=255) catcaGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAgcat > 2:152768/1‑88 (MQ=255) tcaGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACct > 1:2715215/1‑91 (MQ=255) tcaGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACct > 2:3378609/1‑91 (MQ=255) caGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACctc < 2:1429018/91‑1 (MQ=255) caGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACctc < 1:2150368/91‑1 (MQ=255) aGTTGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACctct < 2:2087660/91‑1 (MQ=255) ttGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTa > 1:696014/1‑91 (MQ=255) ttGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTa > 2:879775/1‑91 (MQ=255) tGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTaa > 2:371075/1‑91 (MQ=255) tGTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTaa < 2:975923/91‑1 (MQ=255) gTAATTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTaaa < 2:3066959/91‑1 (MQ=255) aTTGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAg < 2:2177303/91‑1 (MQ=255) tGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAgat < 1:2553446/91‑1 (MQ=255) tGATGCA‑AAAAAATTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAgat > 2:1241076/1‑91 (MQ=255) gttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAGCGCTTGCTAGTACCTCTTAAAAAgatgat > 1:704007‑M1/59‑91 (MQ=255) ttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAGCGCTTGCTAGTACCTCTTAAAAAGatgatg > 1:614417‑M1/58‑91 (MQ=255) caaaaaaaTTATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGc < 2:67484/89‑1 (MQ=255) attgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCt > 2:2832629‑M1/56‑91 (MQ=255) aaattatCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCa < 2:134345/87‑1 (MQ=255) attatCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAg < 2:523152/89‑1 (MQ=255) ttatCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAgc < 1:1082257/90‑1 (MQ=255) ttatCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAgc < 1:1710373/90‑1 (MQ=255) tatCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAgcg > 2:2269641/1‑91 (MQ=255) atCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAgcgc > 1:2605652/1‑91 (MQ=255) atCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAgcgc > 2:2622895/1‑91 (MQ=255) atCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAgcgc > 1:3377286/1‑91 (MQ=255) tCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCt > 1:3310789/1‑91 (MQ=255) aaaaCTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTct < 1:3190691/91‑1 (MQ=255) aaaaCTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCACTTAAAAAGATGATGCTAGCAAGCGCTTTTct < 2:1384615/91‑1 (MQ=255) aCTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTctata > 1:2114141/1‑91 (MQ=255) cTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTctatac > 1:2392390/1‑91 (MQ=255) cTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTctatac < 2:852969/91‑1 (MQ=255) gaagatCAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTctatacta < 2:3573615/91‑1 (MQ=255) gaagaaCAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCATTTctatacta > 1:470103/1‑91 (MQ=255) aagaaCAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTctatactat > 1:1610428/1‑91 (MQ=255) aagaaCAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTctatactat < 1:1290321/91‑1 (MQ=255) aagaaCAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTctatactat < 2:2669350/91‑1 (MQ=255) agaaCAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTctatactata < 2:178873/91‑1 (MQ=255) gaaCAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACtatat < 1:1809508/91‑1 (MQ=255) gaaCAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACtatat > 1:2063837/1‑91 (MQ=255) gaaCAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACtatat < 2:2451654/91‑1 (MQ=255) aaCAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACtatata > 2:3520810/1‑91 (MQ=255) aaCAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACtatata > 1:437941/1‑91 (MQ=255) aCAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAgatga < 1:2972705/61‑1 (MQ=255) aCAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAgatga > 2:2972705/1‑61 (MQ=255) aCAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTatatat < 1:3806829/91‑1 (MQ=255) aaTCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAACAAGATGATGCTAGCAAGCGCTTTTCTATACTATAtatta < 2:601059/91‑1 (MQ=255) aTCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATAtattat > 1:975450/1‑91 (MQ=255) tCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATattatt < 2:3694215/91‑1 (MQ=255) tCTTCAGATAAAAACAAATAATAACAAAGCGCTCGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATattatt > 2:972526/1‑91 (MQ=255) cTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAACAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTAttt > 2:3407140/1‑91 (MQ=255) ttCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTAtttt < 1:2697223/91‑1 (MQ=255) ttCAGATAAAAACAAATAATAACAAAGCGCTCGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTAtttt > 2:2864456/1‑91 (MQ=255) cAGATAAAAACAAATGATAACAAAGCGCTTGCTAGTACCTCTTAAAATGATGATGCTAGCGAGCGCTTTTCTATACTATATATTATTTTTc < 2:1107995/91‑1 (MQ=255) cAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTc < 1:944355/91‑1 (MQ=255) aGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCt < 1:8003/91‑1 (MQ=255) gATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTa > 1:1136664/1‑91 (MQ=255) aaaaCAAATAATAACAAAGCGCTTGATAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAAt < 1:3614814/91‑1 (MQ=255) aaCAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAAttt > 1:2757520/1‑91 (MQ=255) aaCAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAAttt > 1:794949/1‑91 (MQ=255) aCAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAAtttt < 2:3826563/91‑1 (MQ=255) aCAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAAtttt < 2:1001812/91‑1 (MQ=255) cAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTa > 2:1610015/1‑91 (MQ=255) aataatAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAac > 1:2924023/1‑91 (MQ=255) ataataACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAaca < 2:788196/91‑1 (MQ=255) aataaCAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAACAcc < 2:2754916/91‑1 (MQ=255) aataaCAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAACAcc < 2:1762869/91‑1 (MQ=255) ataaCAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAACAccc < 2:2720567/91‑1 (MQ=255) ataaCAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTAAACAccc > 1:1944050/1‑91 (MQ=255) ataaCAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTATTCTAAAATTTTAACAccc > 2:654394/1‑91 (MQ=255) ataaCAAAGCGCTCGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTCTTCTATACTATATATTATTTTTCTAAAATTTTAACAccc > 2:3772828/1‑91 (MQ=255) AAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAACACCCTCTTg > 1:1493222‑M1/1‑91 (MQ=255) | AAAGAAGACAGACGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAACACCCTCTTG > USA300TCH1516_ALE/2455656‑2455837 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |