| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012417 | = 1057 | 1423 (0.120) | 488 (0.050) | 49/124 | NT | 24.1% | coding (138/192 nt) | USA300HOU_RS15665 | hypothetical protein |
| ? | NC_012417 | = 1071 | 1977 (0.210) | coding (124/192 nt) | USA300HOU_RS15665 | hypothetical protein | |||||
Only 100 of 13413 total aligned reads displayed.
ATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAATACCTTAAAAC > NC_012417/980‑1161 | ttattTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAg > 2:3143338/1‑91 (MQ=255) tATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGt < 1:1137372‑M2/91‑2 (MQ=255) tATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGt > 1:2141799‑M2/1‑90 (MQ=255) aTTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAACAAGTACTGTCCTATTTTTTTTACAATTGCTGTATGTAGtg < 2:1662491‑M2/91‑3 (MQ=255) aTTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtg > 1:1072415‑M2/1‑89 (MQ=255) aTTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtg > 2:2312555‑M2/1‑89 (MQ=255) tAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtca > 2:924797‑M2/1‑86 (MQ=255) tAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtca > 1:22045‑M2/1‑86 (MQ=255) aaGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcac < 2:3780600‑M2/91‑7 (MQ=255) gatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTcaca > 1:3647263‑M1/53‑91 (MQ=255) gacattagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGCCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACaa > 2:1235051‑M2/25‑91 (MQ=255) gACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaa > 1:3020697‑M2/1‑83 (MQ=255) cattagtcaacactactgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTATTGTGACAAATGCTGTATGTAGTGTCACaaaa > 1:3304661‑M2/23‑91 (MQ=255) cATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaa > 1:2412999‑M2/1‑81 (MQ=255) attagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACaaaaa > 1:336821‑M2/22‑91 (MQ=255) aTTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaa < 1:618932‑M2/91‑12 (MQ=255) ttagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAAt > 2:562011‑M2/21‑91 (MQ=255) ttagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAAt > 1:934089‑M2/21‑91 (MQ=255) ttAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaat < 1:2332012‑M2/91‑13 (MQ=255) ttAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaat < 1:2551534‑M2/91‑13 (MQ=255) aGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTTTTTCTAATGCTGTATGTAGtgtcacaaatataa < 2:1814652‑M2/91‑15 (MQ=255) gtgtTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaataag < 1:694029‑M2/91‑16 (MQ=255) gtgtTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTCGTGACAAATGCTGTATGTAGtgtcacaaaaataag < 2:3217566‑M2/91‑16 (MQ=255) gtTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaataagac > 2:2011527‑M2/1‑74 (MQ=255) gtTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaataagac > 1:2846085‑M2/1‑74 (MQ=255) caacactaaTGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaataagac < 1:1921922‑M2/87‑18 (MQ=255) gACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACaaa > 1:1595690/1‑91 (MQ=255) actaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAAc > 1:316667‑M2/12‑91 (MQ=255) ctaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACg < 2:3705264‑M2/81‑1 (MQ=255) aatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCa > 2:2752495‑M2/9‑91 (MQ=255) aatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCa < 1:1655339‑M2/83‑1 (MQ=255) atgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCaa > 2:1740817‑M2/8‑91 (MQ=255) atgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTCTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCaa < 1:3092861‑M2/84‑1 (MQ=255) gtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAata > 1:1390663‑M2/6‑91 (MQ=255) gtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAata > 2:3848434‑M2/6‑91 (MQ=255) gtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAata > 1:1531490‑M2/6‑91 (MQ=255) cttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAatata > 1:2275352‑M2/4‑91 (MQ=255) cttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAatata > 1:2904486‑M2/4‑91 (MQ=255) cttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAatata > 2:1001329‑M2/4‑91 (MQ=255) ttttGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATtg > 1:1862490/1‑91 (MQ=255) tttGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCAAAAAAATAAGACAAACGAAATATATTGt > 2:1373225‑M2/1‑90 (MQ=255) ttgttgATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtg < 2:1944466‑M2/91‑3 (MQ=255) ttgttgATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtg < 1:1207709‑M2/91‑3 (MQ=255) ttgttgATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtg < 1:1000628‑M2/91‑3 (MQ=255) tgttgATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgt > 2:629877‑M2/1‑88 (MQ=255) ttgATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtca < 2:3488637‑M2/91‑6 (MQ=255) tgATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcac > 2:427580‑M2/1‑85 (MQ=255) gATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcaca < 1:554608‑M2/91‑8 (MQ=255) gATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcaca > 2:2391353‑M2/1‑84 (MQ=255) gATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcaca > 1:2065059‑M2/1‑84 (MQ=255) gATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcaca > 1:178527‑M2/1‑84 (MQ=255) gATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcaca > 1:879893‑M2/1‑84 (MQ=255) gATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcaca < 1:3855211‑M2/91‑8 (MQ=255) gATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATAGTGtgtcaca < 1:3714237‑M2/91‑8 (MQ=255) ttttttATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaa > 2:1158954‑M2/1‑82 (MQ=255) tttttATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaa > 2:500812‑M2/1‑81 (MQ=255) tttttATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaa > 1:1279762‑M2/1‑81 (MQ=255) tttATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaat > 2:1436504‑M2/1‑79 (MQ=255) ttATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaata < 2:708338‑M2/91‑14 (MQ=255) tataAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataa < 2:3632438‑M2/91‑15 (MQ=255) ataAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataag > 2:2664630‑M2/1‑76 (MQ=255) aaaaaGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataagaca > 2:254059‑M2/1‑73 (MQ=255) ttgcgttTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGt > 1:3434645‑M1/8‑91 (MQ=255) aaGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataagacagta > 1:3784207‑M2/1‑70 (MQ=255) tACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAg < 1:750861/91‑1 (MQ=255) aCTGTCTTATTTTCGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGc < 1:2786461/91‑1 (MQ=255) cTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACTGTACAGCt > 2:3570017/1‑91 (MQ=255) cTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCt > 2:1876496/1‑91 (MQ=255) GTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCttt > 2:2904457‑M1/1‑91 (MQ=255) TTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTa > 2:282804‑M1/1‑91 (MQ=255) ATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATg > 2:847828‑M1/1‑91 (MQ=255) ATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATg < 2:2239724‑M1/91‑1 (MQ=255) TTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGa > 2:216055‑M1/1‑91 (MQ=255) TTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGat < 1:2961486‑M1/91‑1 (MQ=255) tttGTGACAAATGCTGTATGTAGtgtcacaaaaataagacagtacttttttataaaaaatcaacaaaaaagacattagtcaacactaatgt < 1:1715155‑M2/91‑69 (MQ=255) TGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGAc > 1:3573645‑M1/1‑70 (MQ=255) TGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGata > 1:2623444‑M1/1‑89 (MQ=255) TGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCAc < 2:2597026‑M1/91‑1 (MQ=255) TGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCAc < 2:1589298‑M1/91‑1 (MQ=255) GACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACt > 2:3073569‑M1/1‑91 (MQ=255) aCAAATGCTGTATGTAGtgtcacaaaaataagacagtacttttttataaaaaatcaacaaaaaagacattagtcaacactaatgtcttaaa < 1:3506796‑M2/91‑75 (MQ=255) aCAAATGCTGTATGTAGtgtcacaaaaataagacagtacttttttataaaaaatcaacaaaaaagacattagtcaacactaatgtcttaaa < 1:1992087‑M2/91‑75 (MQ=255) ACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACtt < 2:3352959‑M1/91‑1 (MQ=255) ACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACtt > 1:1328986‑M1/1‑91 (MQ=255) CAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACttt < 2:3295007‑M1/91‑1 (MQ=255) AAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTa > 1:810342‑M1/1‑91 (MQ=255) AAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTa > 2:1086941‑M1/1‑91 (MQ=255) AAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTa > 1:2483020‑M1/1‑91 (MQ=255) aaTGCTGTATGTAGtgtcacaaaaataagacagtacttttttataaaaaatcaacaaaaaagacattagtcaacactaatgtcttaaataa < 1:489282‑M2/91‑78 (MQ=255) aTGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataagacagtacttttttataaaaaatcaacaaaaa < 2:2987702‑M2/91‑47 (MQ=255) aTGCTCTATGTATCGTCACAAAAATAAGACTCACGCACTATATAGTGTCTCAAAACTAAGACAGTACAGCTCTGTAAGATATCACATTaaa > 2:3419597/1‑91 (MQ=255) cTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAATa > 2:1507837/1‑91 (MQ=255) cTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAATa < 1:2703453/91‑1 (MQ=255) gtatgtaGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAATAcc < 1:3244478/91‑1 (MQ=255) gtatgtaGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAATAcc > 2:2093082/1‑91 (MQ=255) gtatgtaGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAATAcc < 2:771857/91‑1 (MQ=255) tatgtaGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAATACCt > 2:2462232/1‑91 (MQ=255) tgtaGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAATACCTTa < 1:424424/91‑1 (MQ=255) ggtaGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAATACCTTa < 1:1462194/90‑1 (MQ=255) gtaGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAATACCTTaa < 2:1303756/91‑1 (MQ=255) | ATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAATACCTTAAAAC > NC_012417/980‑1161 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |