| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 280894 | 202 (1.060) | 18 (0.110) +TTAATTGGGAGTA |
7/134 | NT | 10.5% | intergenic (‑146/+11) | USA300HOU_RS01225/USA300HOU_RS01230 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | 855632 = | 165 (0.870) | intergenic (+163/‑597) | zipA_1/cggR | Cell division protein ZipA/Central glycolytic genes regulator | |||||
Only 100 of 209 total aligned reads displayed.
ATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTT > USA300TCH1516_ALE/855543‑855722 | tttttATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGa < 2:2648469/91‑1 (MQ=255) ttttATAATTGTTAATTAGGGGAGCGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGAc > 2:1552511/1‑91 (MQ=255) tttATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACa < 2:2113610/91‑1 (MQ=255) ttATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAg > 1:2136838/1‑91 (MQ=255) aaTTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAAt < 2:3043108/91‑1 (MQ=255) aTTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATg > 1:1518434/1‑91 (MQ=255) ttGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGa > 1:954224/1‑91 (MQ=255) tttAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATATTGAAATTTATTTTGAGTGAGGGGGGACAGAAATGata < 1:2104005/90‑1 (MQ=255) gTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGata > 2:1180750/1‑91 (MQ=255) ttAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGatat > 1:3210386/1‑91 (MQ=255) tAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATAtt < 1:846412/91‑1 (MQ=255) aTTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATAtttt < 2:31805/91‑1 (MQ=255) ttAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTc > 1:1050757/1‑91 (MQ=255) ttAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTc > 2:3534412/1‑91 (MQ=255) ttAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTc < 1:422971/91‑1 (MQ=255) ggAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCaaa > 2:904082/1‑91 (MQ=255) gagagaTGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCaaaa < 1:1318209/91‑1 (MQ=255) gagagaTGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCaaaa < 2:325199/91‑1 (MQ=255) agagaTGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAat > 1:2885438/1‑91 (MQ=255) agagaTGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAat < 2:121836/91‑1 (MQ=255) gagaTGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAatt > 2:2300808/1‑91 (MQ=255) gatgatACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAattta < 2:3297860/91‑1 (MQ=255) gatgatACTTAAATAGTTAGTTATATATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAattta < 2:933054/91‑1 (MQ=255) atgatACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAatttat < 2:1709967/91‑1 (MQ=255) tgatACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAatttatt > 1:1768523/1‑91 (MQ=255) atACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtc > 1:3810696/1‑91 (MQ=255) atACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtc < 1:3528822/91‑1 (MQ=255) tACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcg < 2:1131667/91‑1 (MQ=255) tACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcg > 2:3007334/1‑91 (MQ=255) aCTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcgt < 1:2515623/91‑1 (MQ=255) aaTAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTcc < 1:871773/91‑1 (MQ=255) aaTAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTcc < 2:1464759/91‑1 (MQ=255) aTAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTGTTTCGTCGTccc < 1:2990834/91‑1 (MQ=255) aTAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTccc > 2:2743753/1‑91 (MQ=255) aacagccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCCCAcc > 2:3751139‑M2/48‑91 (MQ=255) ttagttaTTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCAccc > 2:1815049/1‑91 (MQ=255) ttagttaTTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCAccc < 2:2665407/91‑1 (MQ=255) acagccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCCCacca > 2:1393099‑M2/47‑90 (MQ=255) acagccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCCCacca > 1:3714947‑M2/47‑90 (MQ=255) acagccatgacaaagtaaagtcatagctgttttttaattgggagcaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCCCacca > 2:3099870‑M2/47‑90 (MQ=255) tagttaTTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCAcccc < 2:1567195/91‑1 (MQ=255) tagttaTTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCAcccc > 2:2286084/1‑91 (MQ=255) cagccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCCcaccac > 1:1468992‑M2/46‑89 (MQ=255) agcgatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCacaccaca > 2:3443833‑M2/45‑88 (MQ=255) agccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCccaccaca > 1:3732492‑M2/45‑88 (MQ=255) agccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCCCACcaca > 2:2142134‑M2/45‑91 (MQ=255) agccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCCCACcaca > 2:3652858‑M2/45‑91 (MQ=255) ttatttatTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAAc < 1:644263/91‑1 (MQ=255) ttatttatTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAAc < 2:1557307/91‑1 (MQ=255) ttatttatTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAAc < 2:3550182/91‑1 (MQ=255) ttatttatTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAAc < 1:2699083/91‑1 (MQ=255) ttatttatTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAAc < 2:1659442/91‑1 (MQ=255) atttatttTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACtt < 2:2885438/91‑1 (MQ=255) tttatttTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAAcgtt < 2:2189974/91‑4 (MQ=255) tttatttTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTc < 1:1687929/91‑1 (MQ=255) ttatttTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTcc > 1:1606886/1‑91 (MQ=255) tatttTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACtcgca > 2:2694356/1‑87 (MQ=255) tatttTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCa < 1:2565715/91‑1 (MQ=255) tatttTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCa > 1:1456843/1‑91 (MQ=255) tttACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTg > 1:2323012/1‑91 (MQ=255) cGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCGTTGCCTg > 1:3636665/1‑91 (MQ=255) cGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTg > 1:1032913/1‑91 (MQ=255) cGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTg > 1:57138/1‑91 (MQ=255) cGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTg < 1:77225/91‑1 (MQ=255) ggATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAGATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGt < 1:3346540/91‑1 (MQ=255) ggATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGt < 1:2207772/91‑1 (MQ=255) ggATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGt < 2:2487756/91‑1 (MQ=255) gATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTa < 2:3866418/91‑1 (MQ=255) tAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGa > 1:2857947/1‑91 (MQ=255) gTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGaaa < 2:726083/91‑1 (MQ=255) tGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAAt < 1:2549015/91‑1 (MQ=255) aaTTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTgg > 2:2360937/1‑91 (MQ=255) tttatttTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGaa < 1:903655/91‑1 (MQ=255) tatttTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAAt < 1:1863220/91‑1 (MQ=255) tatttTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAAt < 1:3197725/91‑1 (MQ=255) tatttTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAAt < 1:3197920/91‑1 (MQ=255) ttttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGt < 2:2629737/76‑1 (MQ=255) ttttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGt > 1:2629737/1‑76 (MQ=255) ttttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATcc > 1:2451435/1‑91 (MQ=255) ttttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATcc > 1:2387313/1‑91 (MQ=255) ttttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATcc > 1:358043/1‑91 (MQ=255) ttttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATcc > 1:3427892/1‑91 (MQ=255) ttttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATcc > 1:524996/1‑91 (MQ=255) ttgtgagtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATcc < 2:1320161/88‑1 (MQ=255) tttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCa > 1:812131/1‑91 (MQ=255) ttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCaa < 2:3514780/91‑1 (MQ=255) tgagtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAAt < 1:3298211/91‑1 (MQ=255) agtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAAttt > 1:237686/1‑91 (MQ=255) gagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTtctc < 2:615112/91‑1 (MQ=255) agGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTctct < 1:435735/91‑1 (MQ=255) ggTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTa < 1:2056264/91‑1 (MQ=255) ggTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTa < 1:3033096/91‑1 (MQ=255) gTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTAt < 1:161251/91‑1 (MQ=255) tGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATg < 2:3150419/91‑1 (MQ=255) tGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATg < 1:42967/91‑1 (MQ=255) tGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATg < 2:1996455/91‑1 (MQ=255) gggACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGt > 1:305854/1‑91 (MQ=255) ggACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGtt < 2:125973/91‑1 (MQ=255) ggACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGtt > 1:1719666/1‑91 (MQ=255) ggACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGtt > 2:2244458/1‑91 (MQ=255) | ATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTT > USA300TCH1516_ALE/855543‑855722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |