| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 641988 = | 198 (1.040) | 17 (0.100) | 13/144 | NT | 9.2% | intergenic (+7/+135) | yhdG_1/USA300HOU_RS03060 | putative amino acid permease YhdG/hypothetical protein |
| ? | USA300TCH1516_ALE | 642033 = | 157 (0.920) | intergenic (+52/+90) | yhdG_1/USA300HOU_RS03060 | putative amino acid permease YhdG/hypothetical protein | |||||
Only 100 of 223 total aligned reads displayed.
GATATGATTGAAGAACCTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAGGGCTGAGCCATTTCTAACAAATA > USA300TCH1516_ALE/641943‑642121 | taaggttcagctgcctcgtcttaaatgtcaatttataatacaaaaAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGAttt > 2:3399670‑M1/46‑91 (MQ=255) atatgatTGAAGAACCTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGAtttt < 1:2429558/91‑1 (MQ=255) tatgatTGAAGAACCTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGAttttt < 1:1436958/91‑1 (MQ=255) tatgatTGAAGAACCTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGAttttt < 2:3255349/91‑1 (MQ=255) atgatTGAAGAACCTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGAtttttt > 1:90410/1‑91 (MQ=255) gatTGAAGAACCTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGTGATTTTTTGt < 2:2517505/91‑1 (MQ=255) atTGAAGAACCTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGta < 1:1169646/91‑1 (MQ=255) ttGAAGAACCTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGtat > 2:2765469/1‑91 (MQ=255) ttGAAGAACCTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGtat > 2:1828185/1‑91 (MQ=255) cagctgcctcgtcttaaatgtcaatttataatacaaaaAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGtat > 2:1790914‑M1/39‑91 (MQ=255) tGAAGAACCTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGtatt < 1:697810/91‑1 (MQ=255) tGAAGAACCTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGtatt < 2:3032356/91‑1 (MQ=255) aagaaCCTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGtattat > 2:1629484/1‑91 (MQ=255) gaaCCTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATaa < 2:3521483/91‑1 (MQ=255) aaCGTGAAAGAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATaaa < 1:3489522/91‑1 (MQ=255) aaCCTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATaaa < 1:2017818/91‑1 (MQ=255) aaCCTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATaaa < 1:2017773/91‑1 (MQ=255) ccTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAAtt < 2:1622303/91‑1 (MQ=255) ccTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAAtt > 2:2062746/1‑91 (MQ=255) ccTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAAtt > 2:2351186/1‑91 (MQ=255) aaaaagaaaaaACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACa > 1:3028575/1‑91 (MQ=255) aaaaagaaaaaACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACa > 1:436656/1‑91 (MQ=255) gaaaaaACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTaa > 1:3111642/1‑91 (MQ=255) gaaaaaACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTaa < 1:3410590/91‑1 (MQ=255) aaaaaaCTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAg < 1:2625699/91‑1 (MQ=255) aaaaaaCTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAg < 2:2121622/91‑1 (MQ=255) aaaaaCTTAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGa < 1:1943063/91‑1 (MQ=255) aaaaCTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGAc < 1:2765469/91‑1 (MQ=255) aaaaCTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGAc > 1:3585661/1‑91 (MQ=255) aaaCTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTTTTTTTTTTTTTGACATTTAAGACg > 2:2791602/1‑91 (MQ=255) aaaCTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACg < 2:3575994/91‑1 (MQ=255) cTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAgg < 2:335291/91‑1 (MQ=255) tAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGc < 2:2919386/91‑1 (MQ=255) tAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGc > 2:3819392/1‑91 (MQ=255) tAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGc > 1:1901668/1‑91 (MQ=255) aaaTAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCa < 2:2939138/91‑1 (MQ=255) aaaTAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCa < 2:328123/91‑1 (MQ=255) aataatAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAg > 2:2442803/1‑91 (MQ=255) aataatAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAg > 1:1033125/1‑91 (MQ=255) ataataAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGc < 1:304994/91‑1 (MQ=255) ataataAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGc < 2:568082/91‑1 (MQ=255) ataataAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGc < 2:585979/91‑1 (MQ=255) taataaAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCt > 2:2076393/1‑91 (MQ=255) taataaAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCt > 1:513541/1‑91 (MQ=255) taataaAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCt < 1:1750457/91‑1 (MQ=255) aataaAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTg < 2:1414296/91‑1 (MQ=255) aataaAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTg < 1:2351186/91‑1 (MQ=255) tacaaaaaatcgcacgatacgcctccgaatgaagaaggtttattgtgcgattTTTTGTCTTATAAATTGACATGTAAGACGAGGCAGCTGa > 1:3318515‑M2/53‑91 (MQ=255) ataaAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGa > 2:1992907/1‑91 (MQ=255) ataaAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGa < 2:321222/91‑1 (MQ=255) taaAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGaa > 1:3770161/1‑91 (MQ=255) caaaaaatcgcacgatacgcctccgaatgaagaaggtttattgtgcgattTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAAc > 2:2109995‑M2/51‑91 (MQ=255) caaaaaatcgcacgatacgcctccgaatgaagaaggtttattgtgcgattTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAAc > 2:2110454‑M2/51‑91 (MQ=255) aaaaGAATCGCACGATAAACCTTCTTCATTCGGAGGCGTATCGGGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAAc < 1:3876971/91‑1 (MQ=255) aaaaGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAAc < 2:3320240/91‑1 (MQ=255) aaaGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAAcc > 2:2308051/1‑91 (MQ=255) aGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCtt < 1:2286869/91‑1 (MQ=255) aGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCtt > 1:1286419/1‑91 (MQ=255) aGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCtt > 2:2097154/1‑91 (MQ=255) gAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTta < 2:3244304/91‑1 (MQ=255) gAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTta < 2:1024731/91‑1 (MQ=255) aatcgcacgatacgcctccgaatgaagaaggtttattgtgcgattTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTtat > 1:1661067‑M2/46‑91 (MQ=255) atcgcacgatacgcctccgaatgaagaaggtttattgtgcgattTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTtata > 2:787696‑M2/45‑91 (MQ=255) ATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTtata < 2:965667‑M1/91‑1 (MQ=255) tcgcacgatacgcctccgaatgaagaaggtttattgtgcgattTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTtatat > 2:734682‑M2/44‑91 (MQ=255) TCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTtatat < 1:1368016‑M1/91‑1 (MQ=255) CGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTtatata < 2:2578373‑M1/91‑1 (MQ=255) cacgatacgcctccgaatgaagaaggtttattgtgcgattTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTtatatata > 2:1712492‑M2/41‑91 (MQ=255) cacgatacgcctccgaatgaagaaggtttattgtgcgattTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTtatatata > 1:2258138‑M2/41‑91 (MQ=255) acgatacgcctccgaatgaagaaggtttattgtgcgattTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATaa > 2:2685599‑M2/40‑91 (MQ=255) ACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATaa < 2:1200448‑M1/91‑1 (MQ=255) aTAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTg > 2:3877969/1‑91 (MQ=255) tAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGc < 1:1074386/91‑1 (MQ=255) aaaCCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCt > 2:2819138/1‑91 (MQ=255) aaaCCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCt < 1:862607/91‑1 (MQ=255) aCCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTaa < 2:3771380/91‑1 (MQ=255) cttcttCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAaga > 1:182768/1‑91 (MQ=255) cttcttCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAaga < 2:3111642/91‑1 (MQ=255) ctccgaatgaagaaggtttattgtgcgattTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAaga > 1:753878‑M2/31‑91 (MQ=255) ttcttcATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAagag > 1:3626193/1‑91 (MQ=255) cttcATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGtt > 2:148582/1‑91 (MQ=255) cttcATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGtt < 1:3736803/91‑1 (MQ=255) cATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATGGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAgg < 2:592960/91‑1 (MQ=255) aTTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAggg > 2:2887180/1‑91 (MQ=255) aTTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAggg < 2:94151/91‑1 (MQ=255) aTTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAggg > 1:2835695/1‑91 (MQ=255) aTTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAggg > 1:579446/1‑91 (MQ=255) gAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAGGGCTGAg < 1:2377496/91‑1 (MQ=255) aGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAGGGCTGAGc < 2:3424623/91‑1 (MQ=255) aGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAGGGCTGAGc < 2:3695294/91‑1 (MQ=255) aGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAGGGCTGAGc < 1:2073890/91‑1 (MQ=255) aGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAGGGCTGAGc < 2:111729/91‑1 (MQ=255) ggCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAGGGCTGAGcc > 1:646807/1‑91 (MQ=255) ggCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAGGGCTGAGcc < 2:1555705/91‑1 (MQ=255) gTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAGGGCTGAGCCAtt > 1:3753200/1‑91 (MQ=255) gTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAGGGCTGAGCCAtt > 1:3304542/1‑91 (MQ=255) gTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAGGGCTGAGCCAtt > 1:2657301/1‑91 (MQ=255) tCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAGGGCTGAGCCATTTCt < 2:1880223/91‑1 (MQ=255) gtgcgattTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAGGGCTGAGCCATTTCTaa < 2:3150217‑M2/83‑1 (MQ=255) ttTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAGGGCTGAGCCATTTCTAACAAata < 2:1053513‑M2/89‑1 (MQ=255) | GATATGATTGAAGAACCTGAAAAAGAAAAAACTAAATAATAAAAGAATCGCACAATAAACCTTCTTCATTCGGAGGCGTATCGTGCGATTTTTTGTATTATAAATTGACATTTAAGACGAGGCAGCTGAACCTTATATATAATTGCTAAGAGTTAGGGCTGAGCCATTTCTAACAAATA > USA300TCH1516_ALE/641943‑642121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |