| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 650751 = | 209 (1.100) | 27 (0.150) | 15/152 | NT | 13.3% | intergenic (+3/+49) | USA300HOU_RS03100/rclA | hypothetical protein/putative pyridine nucleotide‑disulfide oxidoreductase RclA |
| ? | USA300TCH1516_ALE | 650786 = | 155 (0.860) | intergenic (+38/+14) | USA300HOU_RS03100/rclA | hypothetical protein/putative pyridine nucleotide‑disulfide oxidoreductase RclA | |||||
Only 100 of 245 total aligned reads displayed.
AACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCGTAATACGGTATATG > USA300TCH1516_ALE/650696‑650876 | aaCAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGt < 1:616088/91‑1 (MQ=255) cAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGttt < 2:832777/91‑1 (MQ=255) cAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGttt < 2:3265086/91‑1 (MQ=255) cAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGttt < 1:2705627/91‑1 (MQ=255) cgatggccgaatcatttaatgatttatttaatttctagacaaaacataaaagCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGtttt > 2:1013860‑M1/53‑91 (MQ=255) aaGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGtttt > 2:2765140/1‑91 (MQ=255) aGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGttttt > 1:1105760/1‑91 (MQ=255) aGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGttttt < 2:1105760/91‑1 (MQ=255) aGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGttttt < 1:2890925/91‑1 (MQ=255) gATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTa < 2:2577919/91‑1 (MQ=255) gATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTa > 2:2164935/1‑91 (MQ=255) atggccgaatcatttaatgatttatttaatttctagacaaaacataaaaaCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTa > 2:1295491‑M1/51‑91 (MQ=255) aTAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTAt > 1:1881101/1‑91 (MQ=255) ggccgaatcatttaatgatttatttaatttctagacaaaacataaaagCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATg > 1:1765681‑M1/49‑91 (MQ=255) ggccgaatcatttaatgatttatttaatttctagacaaaacataaaagCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATg > 1:3376243‑M1/49‑91 (MQ=255) ggccgaatcatttaatgatttatttaatttctagacaaaacataaaagCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATg > 1:3375563‑M1/49‑91 (MQ=255) ggcccaatcatttaatgatttatttaatttctagacaaaacataaaagCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATg > 1:3235165‑M1/49‑91 (MQ=255) aGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACCACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGt > 1:3279048/1‑91 (MQ=255) aGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGt > 2:2386766/1‑91 (MQ=255) gAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGtt < 2:3170710/91‑1 (MQ=255) aaGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGtttt > 2:873341/1‑91 (MQ=255) aGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTg < 2:3400021/91‑1 (MQ=255) tAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTa < 1:2352363/91‑1 (MQ=255) tAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTa < 2:5456/91‑1 (MQ=255) tAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGAGCCACCAGGTTTTTATGTTTTGTCTa < 2:2216123/91‑1 (MQ=255) aaaGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAg < 2:2822977/91‑1 (MQ=255) aaaGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAACGTGTGCCACCAGGTTTTTATGTTTTGTCTAg > 1:3106992/1‑91 (MQ=255) gAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGaaa > 1:2288990/1‑91 (MQ=255) gAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGaaa < 2:1676258/91‑1 (MQ=255) aaaaTTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAAtt > 2:3553424/1‑91 (MQ=255) aaaaTTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAAtt > 2:1177845/1‑91 (MQ=255) aaaTTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATta > 2:2488244/1‑91 (MQ=255) aaaTTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTCGTCTAGAAATta > 2:1606377/1‑91 (MQ=255) aTTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATtaaa < 1:3211836/91‑1 (MQ=255) tAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATtaaata > 1:1013842/1‑91 (MQ=255) tAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATtaaata > 1:362585/1‑91 (MQ=255) tAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATtaaata > 2:157348/1‑91 (MQ=255) aGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATtaaataa < 1:3828655/91‑1 (MQ=255) aGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATtaaataa < 1:150987/91‑1 (MQ=255) aGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATtaaataa > 2:3212452/1‑91 (MQ=255) aGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATtaaataa > 2:2941120/1‑91 (MQ=255) aaaagcgaaaagcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTaaataaat > 1:865168/1‑91 (MQ=255) aaagcgaaaagcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATc > 1:2012874/1‑91 (MQ=255) gcgaaaagcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCAtt > 2:2421287/1‑91 (MQ=255) cgaaaagcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGCTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTa > 2:3827167/1‑91 (MQ=255) gaaaagcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTaa < 1:997423/91‑1 (MQ=255) gaaaagcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTaa < 2:2522777/91‑1 (MQ=255) aaagcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAAt > 2:2981512/1‑91 (MQ=255) aagcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTATATGTTTTGTCTAGAAATTAAATAAATCATTAAATg > 2:3833327/1‑91 (MQ=255) cacaACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGAtt > 1:132337/1‑91 (MQ=255) caacaaTAAAGCCTGATTGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCg < 2:682935/91‑1 (MQ=255) caacaaTAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCg < 2:1335285/91‑1 (MQ=255) aacaaTAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCgg < 2:3149160/91‑1 (MQ=255) aacaaTAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCgg < 2:1638848/91‑1 (MQ=255) cataaaaacctggtggcacgcattgaatgatgctgccatcaggCTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGcc > 1:1766081‑M2/44‑91 (MQ=255) caaTAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGcc < 1:1609338/91‑1 (MQ=255) tAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATc > 1:1926162/1‑91 (MQ=255) aaaGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCg > 1:3640211/1‑91 (MQ=255) ctggtggcacgcattgaatgatgctgccatcaggTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGa > 2:1454465‑M2/35‑91 (MQ=255) CTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGa < 1:3730880‑M1/91‑1 (MQ=255) ggtggcacgcattgaatgatgctgccatcaggTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATg > 1:1503299‑M2/33‑91 (MQ=255) aTGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGc > 1:3558095/1‑91 (MQ=255) aTGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGc < 1:3012110/91‑1 (MQ=255) tGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCg > 2:3622186/1‑91 (MQ=255) cagcaTCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGtat > 1:276440/1‑91 (MQ=255) agcaTCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGtata > 2:333609/1‑91 (MQ=255) agcaTCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGtata > 2:335209/1‑91 (MQ=255) acgcattgaatgatgctgccatcaggTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGtata > 1:1188546‑M2/27‑91 (MQ=255) acgcattgaatgatgctgccatcaggTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGtata > 1:161432‑M2/27‑91 (MQ=255) acgcattgaatgatgctgccatcaggTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGtata > 1:2908394‑M2/27‑91 (MQ=255) gcaTCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATaa < 1:1415273/91‑1 (MQ=255) gcaTCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATaa < 2:1041726/91‑1 (MQ=255) gcaTCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATaa < 2:3064776/91‑1 (MQ=255) cgcattgaatgatgctgccatcaggTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATaa > 2:470480‑M2/26‑91 (MQ=255) gcattgaatgatgctgccatcaggTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATaaa > 1:2528670‑M2/25‑91 (MQ=255) gcattgaatgatgctgccatcaggTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATaaa > 2:2853623‑M2/25‑91 (MQ=255) catcatTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATaaa < 1:2164935/91‑1 (MQ=255) atcatTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAat < 2:1610809/91‑1 (MQ=255) ttCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAAtatta < 2:878470/91‑1 (MQ=255) ttCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAAtatta > 1:820351/1‑91 (MQ=255) cAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTAtc > 2:3103095/1‑91 (MQ=255) aTGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTAtctc > 1:1392773/1‑91 (MQ=255) aTGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTAtctc < 2:3642137/91‑1 (MQ=255) aTGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAAGCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTAtctc < 2:234131/91‑1 (MQ=255) tGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCg < 2:201617/91‑1 (MQ=255) gCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCGt > 1:3533949/1‑91 (MQ=255) cGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCGTa > 2:1689341/1‑91 (MQ=255) gTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCGTaa < 2:1533295/91‑1 (MQ=255) tGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCGTAAt > 1:1361178/1‑91 (MQ=255) gccatcaggTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCGTAATa > 1:2798644‑M2/10‑91 (MQ=255) gCCTCCAGGATTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCGTAATa < 1:3487568/91‑1 (MQ=255) gCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCGTAATa < 1:84038/91‑1 (MQ=255) gCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCGTAATa < 1:778701/91‑1 (MQ=255) gCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCGTAATa < 2:1921150/91‑1 (MQ=255) gCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCGTAATa > 2:2246449/1‑91 (MQ=255) ccaccaGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCGTAATAc < 1:2842446/91‑1 (MQ=255) caccaGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCGTAATACg > 2:2108822/1‑91 (MQ=255) caccaGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCGTAATACg < 1:1829944/91‑1 (MQ=255) accaGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCGTAATACgg > 2:1728812/1‑91 (MQ=255) gTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCGTAATACGGTatat > 1:340667‑M2/2‑91 (MQ=255) | AACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTAGGATGCGTATAAATATTATCTCGTAATACGGTATATG > USA300TCH1516_ALE/650696‑650876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |