| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 682231 | 188 (0.990) | 24 (0.140) | 14/140 | NT | 12.1% | intergenic (‑73/+36) | USA300TCH1516_00616/rcsF_2 | hypothetical protein/Outer membrane lipoprotein RcsF |
| ? | USA300TCH1516_ALE | = 682253 | 186 (1.120) | intergenic (‑95/+14) | USA300TCH1516_00616/rcsF_2 | hypothetical protein/Outer membrane lipoprotein RcsF | |||||
Only 100 of 330 total aligned reads displayed.
ATCCTCCTTTACTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACTTTTCAGCATCAATATTAGAATCTT > USA300TCH1516_ALE/682163‑682343 | atCCTCCTTTATTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGCGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGtata > 2:2539587/1‑91 (MQ=255)atCCTCCTTTACTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGtata < 1:499788/91‑1 (MQ=255) tcctccTTTACTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAg < 1:3441154‑M2/91‑2 (MQ=255) aaagtttgagaaagataataaaccagtttatgaagaaaataatatgaaaaaataaagaATCAACTCCCGATACCATCGCTAAAGCGTATAg > 2:3535375‑M1/59‑91 (MQ=255) cctcctTTACTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAgg < 2:1929832‑M2/91‑3 (MQ=255) ctcctTTACTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAggg < 1:2291935‑M2/91‑4 (MQ=255) ctcctTTACTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAggg < 1:3791505‑M2/91‑4 (MQ=255) ctcctTTACTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAggg > 1:1637185‑M2/1‑88 (MQ=255) tcctTTACTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAggga < 1:958169‑M2/91‑5 (MQ=255) ctTTACTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAgggagt > 1:2897‑M2/1‑85 (MQ=255) ctTTACTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAgggagt > 1:2654073‑M2/1‑85 (MQ=255) tttACTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAgggagtt < 2:423363‑M2/91‑8 (MQ=255) tttACTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAgggagtt < 1:2677258‑M2/91‑8 (MQ=255) tACTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAgggagttga < 1:1674591‑M2/91‑10 (MQ=255) cTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGAtt > 1:1744297/1‑91 (MQ=255) cTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGAtt > 2:554202/1‑91 (MQ=255) cTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGAtt < 1:2385253/91‑1 (MQ=255) ttttAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATGAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTc > 2:3418336/1‑91 (MQ=255) ttttAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTc > 2:1552679/1‑91 (MQ=255) ttttAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTc > 1:3732803/1‑91 (MQ=255) agataataaaccagtttatgaagaaaataatatgaaaaaataaagaATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCt > 1:1993942‑M1/47‑91 (MQ=255) ttAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCtt < 2:1631912/91‑1 (MQ=255) ttAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCtt < 1:443181/91‑1 (MQ=255) ttAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCtt < 2:2454573/91‑1 (MQ=255) tAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGTAGTTGATTCttt < 1:2978043/91‑1 (MQ=255) tAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCttt < 2:2750714/91‑1 (MQ=255) tAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCttt < 1:1689187/91‑1 (MQ=255) aaaaaGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTa > 1:1243786/1‑91 (MQ=255) aaaaaGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTa > 1:2096993/1‑91 (MQ=255) aaaaGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTAt < 2:3276422/91‑1 (MQ=255) aaaGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTAtt < 1:2933153/91‑1 (MQ=255) aGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTAtttt < 2:474287/91‑1 (MQ=255) ggTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTAttttt < 1:3174290/91‑1 (MQ=255) ggTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTAttttt > 2:708322/1‑91 (MQ=255) ggTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTAttttt > 2:1026398/1‑91 (MQ=255) gTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCAGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTAtttttt > 1:3072255/1‑91 (MQ=255) ttatttatAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTc > 2:2132230/1‑91 (MQ=255) tatttatAAAATAGGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCa < 2:12677/91‑1 (MQ=255) tttatAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCata > 1:1498714/1‑91 (MQ=255) tttatAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCata > 2:733191/1‑91 (MQ=255) ttatAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCatat < 2:1683729/91‑1 (MQ=255) ataAAATAAGTTATAAGAGGATATCTGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCAtatta > 2:2522077/1‑91 (MQ=255) ataAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCAtatta > 2:1884411/1‑91 (MQ=255) taAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCAtattat < 2:3319637/91‑1 (MQ=255) aaaTAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTAttt < 1:2621342/91‑1 (MQ=255) aaaTAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTAttt > 1:265938/1‑91 (MQ=255) aaTAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTAtttt > 2:85651/1‑91 (MQ=255) aaGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTttctt < 1:83780/91‑1 (MQ=255) aGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTttcttc > 1:1013810/1‑91 (MQ=255) gTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCa > 1:2169313/1‑91 (MQ=255) ttATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCAt < 1:2437432/91‑1 (MQ=255) ataAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATaa > 2:3647122/1‑91 (MQ=255) ataAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATaa < 2:1524656/91‑1 (MQ=255) taAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATaaa > 2:2833256/1‑91 (MQ=255) agagGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACt > 1:311935/1‑91 (MQ=255) ggATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGt < 2:1090370/91‑1 (MQ=255) gATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGtt < 1:2075269/91‑1 (MQ=255) atatatGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGttt > 2:1383309/1‑91 (MQ=255) atatatGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGttt < 2:3816776/91‑1 (MQ=255) tatatGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTtta < 2:2169313/91‑1 (MQ=255) atatGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAgggagttgatgaacatatatcctcttataacttattttataaataaccttt < 1:1556074‑M2/91‑52 (MQ=255) tGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATaaa < 2:2305687/79‑1 (MQ=255) tcatcaACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCtt > 1:2235721/1‑91 (MQ=255) TCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTtct < 1:3332338‑M1/91‑1 (MQ=255) TCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTtct > 2:3861335‑M1/1‑91 (MQ=255) TCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTtct > 2:811160‑M1/1‑91 (MQ=255) TCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTtct > 2:239496‑M1/1‑91 (MQ=255) aaCTCCCGATACCATCGCTAAAGCGTATAgggagttgatgaacatatatcctcttataacttattttataaataacctttttaaaagtaaa < 1:2751673‑M2/91‑63 (MQ=255) AACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCa < 2:1443692‑M1/91‑1 (MQ=255) AACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCa < 2:3033565‑M1/91‑1 (MQ=255) CTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCaaa < 2:204100‑M1/91‑1 (MQ=255) CTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCaaa < 1:1078953‑M1/91‑1 (MQ=255) CTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCaaa < 2:2942954‑M1/91‑1 (MQ=255) CTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCaaa < 2:2646629‑M1/91‑1 (MQ=255) tCCCGATACCATCGCTAAAGCGTATAgggagttgatgaacatatatcctcttataacttattttataaataacctttttaaaagtaaagga < 1:2561862‑M2/91‑66 (MQ=255) CCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACt > 1:2455033‑M1/1‑91 (MQ=255) CCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACtt < 1:708749‑M1/91‑1 (MQ=255) CCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACtt < 1:56867‑M1/91‑1 (MQ=255) CCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACtt < 1:1577529‑M1/91‑1 (MQ=255) cGATACCATCGCTAAAGCGTATAgggagttgatgaacatatatcctcttataacttattttataaataacctttttacaagtaaaggagga < 2:2892141‑M2/91‑69 (MQ=255) cGATACCATCGCTAAAGCGTATAgggagttgatgaacatatatcctcttataacttattttataaataacctttttaaaagtcaaggagga < 2:1179444‑M2/91‑69 (MQ=255) CGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACttt < 2:2598058‑M1/91‑1 (MQ=255) aTACCATCGCTAAAGCGTATAgggagttgatgaacatatatcctcttataacttattttataaataacctttttaaaagtaaaggaggata < 1:1793653‑M2/91‑71 (MQ=255) aTACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACTTTTc > 1:397344/1‑91 (MQ=255) tACCATCGCTAAAGCGTATAgggagttgatgaacataaatcctcttataacttattttataaataacctttttaaaagtaaaggaggatat < 1:3275033‑M2/91‑72 (MQ=255) aCCATCGCTAAAGCGTATAgggagttgatgaacatatatcctcttataacttattttataaataacctttttaaaagtaaaggaggatata < 2:3574133‑M2/91‑73 (MQ=255) ccATCGCTAAAGCGTATAgggagttgatgaacatatatcctcttataacttattttataaataacctttttaaaagtaaaggaggatatac < 2:1474675‑M2/91‑74 (MQ=255) ccATCGCTAAAGCGTATAgggagttgatgaacatatatcctcttataacttattttataaataacctttttaaaagtaaaggaggatatac < 1:1911488‑M2/91‑74 (MQ=255) cATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACTTTTCAGCa < 2:2625933/91‑1 (MQ=255) aTCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACTTTTCAGCAt < 2:3591037/91‑1 (MQ=255) tCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACTTTTCAGCATc < 1:2016895/91‑1 (MQ=255) tCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACTTTTCAGCATc > 2:827838/1‑91 (MQ=255) cTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACTTTTCAGCATCAat > 2:1851869/1‑91 (MQ=255) aGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACTTTTCAGCATCAATATTa < 1:3673337/91‑1 (MQ=255) gCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACTTTTCAGCATCAATATTAg > 1:746789/1‑91 (MQ=255) gCGTATAGGGAGTTGATTCTTTATTATTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACTTTTCAGCATCAATATTAg > 1:3203905/1‑91 (MQ=255) cGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACTTTTCAGCATCAATATTAGa < 2:1819556/91‑1 (MQ=255) ataGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACTTTTCAGCATCAATATTAGAAtc > 1:1383717/1‑91 (MQ=255) taGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACTTTTCAGCATCAATATTAGAAtct < 1:3588859/91‑1 (MQ=255) aGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACTTTTCAGCATCAATATTAGAAtctt > 2:3696143/1‑91 (MQ=255) | ATCCTCCTTTACTTTTAAAAAGGTTATTTATAAAATAAGTTATAAGAGGATATATGTTCATCAACTCCCGATACCATCGCTAAAGCGTATAGGGAGTTGATTCTTTATTTTTTCATATTATTTTCTTCATAAACTGGTTTATTATCTTTCTCAAACTTTTCAGCATCAATATTAGAATCTT > USA300TCH1516_ALE/682163‑682343 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |