| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 1970896 | 158 (0.830) | 19 (0.110) | 11/142 | NT | 11.4% | intergenic (+85/‑648) | USA300HOU_RS09825/USA300HOU_RS09830 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | = 1970915 | 155 (0.920) | intergenic (+104/‑629) | USA300HOU_RS09825/USA300HOU_RS09830 | hypothetical protein/hypothetical protein | |||||
Only 100 of 277 total aligned reads displayed.
CTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCTTAAATCATATTTA > USA300TCH1516_ALE/1970823‑1971005 | gaaaatcactacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACA‑‑AGAAATTAGATATTTCt > 2:1588507‑M1/66‑91 (MQ=255) gATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTt > 1:2377698‑M2/1‑90 (MQ=255) atcactacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCTTg > 1:919674‑M1/62‑91 (MQ=255) aTCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtg < 2:1133037‑M2/91‑3 (MQ=255) aTCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtg < 2:2404714‑M2/91‑3 (MQ=255) tCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgt < 1:1004794‑M2/91‑4 (MQ=255) cactacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCTTGTc > 2:619092‑M1/60‑91 (MQ=255) cacaACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtc > 1:1096490‑M2/1‑87 (MQ=255) actacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACA‑‑AGAAATTAGATATTTCTTGTCAtc > 1:932236‑M1/59‑91 (MQ=255) acaACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtca < 2:2386770‑M2/91‑6 (MQ=255) acaACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtca > 1:2841806‑M2/1‑86 (MQ=255) acaACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtca < 2:2298865‑M2/91‑6 (MQ=255) acaACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtca > 2:3599914‑M2/1‑86 (MQ=255) atacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCTTGTCAt > 2:3855571‑M1/58‑91 (MQ=255) acaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCTTGTCAtct > 2:2921416‑M1/56‑91 (MQ=255) cTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtcatctc < 2:257847‑M2/91‑10 (MQ=255) cTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtcatctc > 1:1786828‑M2/1‑82 (MQ=255) tATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATctct < 1:846851/91‑1 (MQ=255) aaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCTTGTCATctct > 1:1150094‑M1/54‑91 (MQ=255) aaacaatgtcttcctataatttgtaaacataagttcatttgagtgttaaaaaaGAGATGACATTAGAAATTAGATATTTCTTGTCATctct > 1:3082776‑M1/54‑91 (MQ=255) tttATTAGTAACAGCATATTTATTTTTTAATATTTTATGCCAAATAAAAGAGCTGACATTAGAAATTAGATATTTCTTGTCATCTCttttt > 2:176158/1‑91 (MQ=255) tattaGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTGATCTCTTTTTTa > 2:3233231/1‑91 (MQ=255) tattaGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTa > 2:1983156/1‑91 (MQ=255) tattaGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTa > 1:2222429/1‑91 (MQ=255) tattaGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTa > 2:1349666/1‑91 (MQ=255) tattaGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTa > 1:1342699/1‑91 (MQ=255) attaGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTaa < 1:1650174/91‑1 (MQ=255) taGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTaaaa < 2:2877887/91‑1 (MQ=255) aGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAAc < 2:203069/91‑1 (MQ=255) aGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAAc < 2:1176334/91‑1 (MQ=255) gTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACt < 2:1077643/91‑1 (MQ=255) gTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACt > 1:2673861/1‑91 (MQ=255) aCAGCATATTTATTTTTTTAAATTAAATGCCAAATAAACGAGATGACATTAGAATTTAGATATTTCTTGTCATCTCTTTTTTAAAACTCaa > 1:873544/1‑91 (MQ=255) aCAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCaa > 2:744915/1‑91 (MQ=255) aCAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCaa < 2:1455682/91‑1 (MQ=255) gCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATg < 1:2532187/91‑1 (MQ=255) cATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGa < 2:3316587/91‑1 (MQ=255) tatttattTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAAc > 1:2925987/1‑91 (MQ=255) atttatttTTTAAAATTAAATGCCGAATAAACGAGATGACATTAGAAATTCGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACt < 2:3601250/91‑1 (MQ=255) atttatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACt > 1:1002561/1‑91 (MQ=255) atttatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACt > 2:2918201/1‑91 (MQ=255) atttatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACt < 2:2735296/91‑1 (MQ=255) ttatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTa > 2:2773060/1‑91 (MQ=255) tatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTAt > 1:148154/1‑91 (MQ=255) atttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATg < 1:2740077/91‑1 (MQ=255) atttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATg < 1:1234145/91‑1 (MQ=255) atttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATg > 1:462587/1‑91 (MQ=255) ttttttAAAATTAAATGCCAAATATTCGAGATGACAATAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGt < 2:3139909/91‑1 (MQ=255) ttttttAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGt < 2:39516/91‑1 (MQ=255) tttttAAAATTAAATGCCAAATAAACGAGATTACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCGAATGAACTTATGtt > 1:3499193/1‑91 (MQ=255) tttttAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGtt < 2:685415/91‑1 (MQ=255) ttttAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGttt < 2:526519/91‑1 (MQ=255) tttAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTa < 2:1620581/91‑1 (MQ=255) tttAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTa < 2:2173423/91‑1 (MQ=255) ttAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTAc > 1:3157213/1‑91 (MQ=255) ttAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTAc < 2:2517870/91‑1 (MQ=255) ttAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTAc < 1:2143991/91‑1 (MQ=255) tAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACa > 2:2809747/1‑91 (MQ=255) aaTTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAAt > 2:1060537/1‑91 (MQ=255) aaTTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAAt > 1:1713096/1‑91 (MQ=255) aTGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAgg > 1:979704/1‑91 (MQ=255) tGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGa > 1:763491/1‑91 (MQ=255) tGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGa > 2:3128661/1‑91 (MQ=255) tGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGa < 1:1942329/91‑1 (MQ=255) gCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGaa < 1:1415161/91‑1 (MQ=255) gCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGaa > 2:1541956/1‑91 (MQ=255) aaTAAACGAGATGACATTAGAAATTAGATATTTCTTGTCAACTCTTTTTTATTACTCAAATGAACTGCTGTTTACCAATTATAGTAAGAct > 2:3610819/1‑90 (MQ=255) tAAACGAGATGACATTAGAAATTAGATATTTCTtgtcatctcttttatttggcatttaattttaaaaaataaatatgctgttactaataaa < 1:3590471‑M2/91‑59 (MQ=255) aaaCGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACAttg < 1:1546127/91‑1 (MQ=255) AGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACAttgtttgt < 2:2613322‑M1/91‑1 (MQ=255) AGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACAttgtttgt > 2:3542928‑M1/1‑91 (MQ=255) AGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACAttgtttgt < 1:2267249‑M1/91‑1 (MQ=255) GATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTa > 2:1813043‑M1/1‑91 (MQ=255) ATGACATTAGAAATTAGATATTTCTTGTCATCTTTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAg > 1:3180931‑M1/1‑91 (MQ=255) GACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTg > 1:737279‑M1/1‑91 (MQ=255) GACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTg < 2:3318681‑M1/91‑1 (MQ=255) aCATTAGAAATTAGATATTTCTtgtcatctcgtttatttggcatttaattttaaaaaataaatatgctgttactagtaaaaatagttgtga < 2:3660778‑M2/91‑70 (MQ=255) aCATTAGAAATTAGATATTTCTtgtcatctcgtttatttggcatttaattttaaaaaataaatatgctgttactaataaaaatagttgtga < 1:2635946‑M2/91‑70 (MQ=255) aCATTAGAAATTAGATATTTCTtgtcatctcgtttatttggcatttaattttaaaaaataaatatgctgttactaataaaaatagttgtga < 1:622944‑M2/91‑70 (MQ=255) CATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGAt < 2:2805147‑M1/91‑1 (MQ=255) tAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGAtttt < 2:471991/91‑1 (MQ=255) tAGAAATTAGATATTTCTGGTCATCTCTTTTTTAAAACTCAATTGAACGTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGAtttt < 2:3479314/91‑1 (MQ=255) aGAAATTAGATATTTCTtgtcatctcgtttatttggcatttaattttaaaaaataaatatgctgttactaataaaaatagttgtgatcgag < 1:3778736‑M2/91‑75 (MQ=255) aGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTc < 2:1044589/91‑1 (MQ=255) aGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTCACAAATTATAGGAAGACATTGTTTGTAGTGATTTTc > 2:3056652/1‑91 (MQ=255) gAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTCTTTGTAGTGATTTTCg > 2:2973204/1‑91 (MQ=255) aaTTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCt < 1:837723/91‑1 (MQ=255) aTTAGATATTTCTTGTCATCTCTTTTTTACAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCtt > 2:3385787/1‑91 (MQ=255) aTTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTAGGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCtt < 1:1050746/91‑1 (MQ=255) ttAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCTTa > 2:673230/1‑91 (MQ=255) tAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCTTaa > 1:3593982/1‑91 (MQ=255) gATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCTTAAAt < 2:1928990/91‑1 (MQ=255) atatTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCTTAAATc < 2:290242/91‑1 (MQ=255) atTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCTTAAATCat > 2:902790/1‑91 (MQ=255) atTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTCATTTTCGCTTAAATCat > 1:3328051/1‑91 (MQ=255) tttCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCTTAAATCata < 1:402630/91‑1 (MQ=255) tttCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCTTAAATCata < 1:3406002/91‑1 (MQ=255) cTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCtt > 1:1946835/1‑80 (MQ=255) ttGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCTTAAATCATATTTa > 1:833200/1‑91 (MQ=255) ttGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCTTAAATCATATTTa < 2:3156177/91‑1 (MQ=255) | CTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCTTAAATCATATTTA > USA300TCH1516_ALE/1970823‑1971005 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |