BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	2032547 =	202 (1.060)	14 (0.080)	11/144	NT	7.4%	intergenic (‑110/+115)	USA300HOU_RS10255/cobQ	hypothetical protein/Cobyric acid synthase
*	?	USA300TCH1516_ALE	2032589 =	169 (0.990)	14 (0.080)	11/144	NT	7.4%	intergenic (‑152/+73)	USA300HOU_RS10255/cobQ	hypothetical protein/Cobyric acid synthase

Only 100 of 247 total aligned reads displayed.

TCTAGGATAGATACTCATTGTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCAGAGTTAACGAGATTTCTTCTG  >  USA300TCH1516_ALE/2032499‑2032679

aatattgataaacgatgaagtttagtaattaatcatatatgtataaacACACACATCAATTTGGTTGTTTCCATCGAAAATAAtgtgtgtg                                                                                            >  1:1464360‑M1/49‑91 (MQ=255)

aatattgataaacgatgaagtttagtaattaatcatatatgtataaacACACACATCAATTTGGTTGTTTCCATCCAAAATAAtgtgtgtg                                                                                            >  2:1467098‑M1/49‑91 (MQ=255)

 cTAGGATAGATACTCATTGTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATgtgtgtgt                                                                                           >  2:1384944/1‑91 (MQ=255)

    ggATAGATACTCATTGTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTta                                                                                        <  2:1938320/91‑1 (MQ=255)

        agataCTCATTGTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACa                                                                                    <  1:1506941/91‑1 (MQ=255)

        agataCTCATTGTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACa                                                                                    >  2:2259472/1‑91 (MQ=255)

        agataCTCATTGTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACa                                                                                    >  2:1703586/1‑91 (MQ=255)

        agataCTCATTGTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACa                                                                                    >  2:3174868/1‑91 (MQ=255)

        agataCTCATTGTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACa                                                                                    <  2:109529/91‑1 (MQ=255)

         gataCTCATTGTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACat                                                                                   >  2:3790539/1‑91 (MQ=255)

             cTCATTGTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACatatat                                                                               <  1:68449/91‑1 (MQ=255)

              tCATTGTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATg                                                                              >  2:3692775/1‑91 (MQ=255)

               tgaagtttagtaattaatcatatatgtataaacACACA‑‑TCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGatt                                                                           >  2:3745678‑M1/34‑91 (MQ=255)

               cATTGTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGa                                                                             <  2:3515169/91‑1 (MQ=255)

               cATTGTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGa                                                                             <  2:2954942/91‑1 (MQ=255)

               cATTGTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGa                                                                             >  1:3571851/1‑91 (MQ=255)

               cATTGTATAATAATTATTCACTAGAACAAAAAAACACACACCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGa                                                                             <  2:806820/91‑1 (MQ=255)

                 ttGTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGatt                                                                           >  2:3500413/1‑91 (MQ=255)

                  tGTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGatta                                                                          <  2:2035053/91‑1 (MQ=255)

                   gTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGattaa                                                                         >  1:2193245/1‑91 (MQ=255)

                   gTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGattaa                                                                         >  2:359532/1‑91 (MQ=255)

                    tataATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGattaat                                                                        >  2:1354894/1‑91 (MQ=255)

                    tataATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGattaat                                                                        <  1:1186969/91‑1 (MQ=255)

                     ttagtaattaatcatatatgtataaacACACA‑‑TCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTAc                                                                     >  1:3778693‑M1/28‑91 (MQ=255)

                      taataaTTATTAACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGattaatta                                                                      <  2:2176972/91‑1 (MQ=255)

                       aataatTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTAc                                                                     <  1:2027524/91‑1 (MQ=255)

                        ataatTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACt                                                                    <  1:734883/91‑1 (MQ=255)

                         taatTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAAGGTGTGTGTTTATACATATATGATTAATTACTa                                                                   <  2:3811032/91‑1 (MQ=255)

                           attattCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTaaa                                                                 <  2:2318399/91‑1 (MQ=255)

                           attattCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTaaa                                                                 >  2:1703176/1‑91 (MQ=255)

                           attattCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTaaa                                                                 <  1:2850350/91‑1 (MQ=255)

                             tattCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACt                                                               <  1:598274/91‑1 (MQ=255)

                             tattCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACt                                                               >  2:925327/1‑91 (MQ=255)

                               ttCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTc                                                             <  1:2551931/91‑1 (MQ=255)

                               ttCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTc                                                             <  2:2967517/91‑1 (MQ=255)

                               ttCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTc                                                             <  1:519793/91‑1 (MQ=255)

                                tCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCa                                                            <  1:2157490/91‑1 (MQ=255)

                                tCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCa                                                            <  2:1786005/91‑1 (MQ=255)

                                tCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCa                                                            >  1:1377341/1‑91 (MQ=255)

                                 cACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCAt                                                           >  1:2729005/1‑91 (MQ=255)

                                 cACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCAt                                                           >  2:3591704/1‑91 (MQ=255)

                                  aCTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATc                                                          >  2:1944016/1‑91 (MQ=255)

                                   cTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCg                                                         >  2:2272697/1‑91 (MQ=255)

                                   cTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCg                                                         <  2:2741684/91‑1 (MQ=255)

                                    tAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGt                                                        <  1:1045301/91‑1 (MQ=255)

                                       aaCAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTa                                                     <  2:3044971/91‑1 (MQ=255)

                                         cAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATc                                                   <  2:3255696/91‑1 (MQ=255)

                                          aaaaaaaCACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCa                                                  <  2:2097321/91‑1 (MQ=255)

                                          aaaaaaaCACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCa                                                  <  2:584640/91‑1 (MQ=255)

                                           aaaaaaCACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCaa                                                 >  2:1176707/1‑91 (MQ=255)

                                           aaaaaaCACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCaa                                                 >  2:3326656/1‑91 (MQ=255)

                                            aaacacacacattattttggatggaaacaaccaaattgatgtgtgtGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAat                                                >  1:370002‑M2/47‑91 (MQ=255)

                                            aaaaaCACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAat                                                >  1:3544583/1‑91 (MQ=255)

                                            aaaaaCACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAat                                                <  2:1260790/91‑1 (MQ=255)

                                            aaaaaCACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAat                                                <  2:762565/91‑1 (MQ=255)

                                             aaaaCACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAata                                               >  1:1712831/1‑91 (MQ=255)

                                             aaaaCACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAata                                               >  1:2608842/1‑91 (MQ=255)

                                              aaaCACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAatat                                              <  1:1089824/91‑1 (MQ=255)

                                               aaCACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATAtt                                             >  1:2001447/1‑91 (MQ=255)

                                               aaCACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATAtt                                             >  1:366983/1‑91 (MQ=255)

                                               aaCACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATAtt                                             >  1:1315705/1‑91 (MQ=255)

                                                ACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACAGATATGATTAATTAGTAAACTTCATCGTTTATcattatag                                            <  1:3607918‑M1/91‑3 (MQ=255)

                                                 cacacattattttggatggaaacaaccaaattgatgtgtgtGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTaa                                           >  2:1162746‑M2/42‑91 (MQ=255)

                                                  acacattattttggatggaaacaaccaaattgatgtgtgtGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTaaa                                          >  1:1835119‑M2/41‑91 (MQ=255)

                                                  ACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTaaa                                          >  1:3296493‑M1/1‑91 (MQ=255)

                                                   CACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAAt                                         >  1:207272‑M1/1‑91 (MQ=255)

                                                    ACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATc                                        <  2:2538617‑M1/91‑1 (MQ=255)

                                                     CATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATcc                                       >  1:2259472‑M1/1‑91 (MQ=255)

                                                     CATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATcc                                       >  1:2621074‑M1/1‑91 (MQ=255)

                                                     CATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATcc                                       <  2:1496057‑M1/91‑1 (MQ=255)

                                                     CATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATcc                                       >  2:1547009‑M1/1‑91 (MQ=255)

                                                      attattttggatggaaacaaccaaattgatgtgtgtGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCa                                      >  2:3041138‑M2/37‑91 (MQ=255)

                                                       TCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCAt                                     <  2:1763476‑M1/91‑1 (MQ=255)

                                                        cAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCAtt                                    >  2:2678000/1‑91 (MQ=255)

                                                         attttggatggaaacaaccaaattgatgtgtgtGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTg                                   >  1:2563480‑M2/34‑91 (MQ=255)

                                                             tGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGc                               >  2:3292359/1‑91 (MQ=255)

                                                               gttgttTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGa                             >  1:3036968/1‑91 (MQ=255)

                                                                ttgttTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGAt                            >  2:1104674/1‑91 (MQ=255)

                                                                ttgttTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGAt                            <  2:1595608/91‑1 (MQ=255)

                                                                 tgttTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATg                           >  2:3622912/1‑91 (MQ=255)

                                                                  gttTCCATCCAACATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGCTGt                          >  1:3002028/1‑91 (MQ=255)

                                                                    ttCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTc                        <  2:683861/91‑1 (MQ=255)

                                                                     tccatccaAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCa                       >  1:3662526/1‑91 (MQ=255)

                                                                       caaccaAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCaga                     >  2:2439050/4‑91 (MQ=255)

                                                                        atccaAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCagag                    <  1:2459896/91‑1 (MQ=255)

                                                                           caAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCAGAGTTa                 >  1:2419453/1‑91 (MQ=255)

                                                                            aaaaTAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCAGAGTTaa                <  1:3868458/91‑1 (MQ=255)

                                                                              aataatGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCAGAGTTAACg              <  1:1020149/91‑1 (MQ=255)

                                                                                taatGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCAGAGTTAACgag            >  2:2165624/1‑91 (MQ=255)

                                                                                taatGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCAGAGTTAACgag            <  1:1168782/91‑1 (MQ=255)

                                                                                 aatGTGTGTGTTTATACATATATGATTAATTACTAAACTTCGTCGTTTATCAATATTAAATCCATTGATGCGATGTTCAGAGTTAACgaga           <  1:830963/91‑1 (MQ=255)

                                                                                    gtgtgtGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCAGAGTTAACGAGAttt        >  1:1914226‑M2/7‑91 (MQ=255)

                                                                                    gtgtgtGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCAGAGTTAACGAGAttt        <  2:3643105‑M2/85‑1 (MQ=255)

                                                                                     tgtgtGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCAGAGTTAACGAGATttc       >  1:2922977‑M2/6‑91 (MQ=255)

                                                                                     tgtgtGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCAGAGTTAACGAGATttc       >  1:3327930‑M2/6‑91 (MQ=255)

                                                                                      gtgtGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCAGAGTTAACGAGATttct      <  2:3094644‑M2/87‑1 (MQ=255)

                                                                                      gtgtGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCAGAGTTAACGAGATttct      <  2:876047‑M2/87‑1 (MQ=255)

                                                                                       tgtGTTTATACATATATGATTAATAACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCAGAGTTAACGAGATttctt     <  2:2390471‑M2/88‑1 (MQ=255)

                                                                                        gtGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCAGAGTTAACGAGATttcttc    <  2:2551350‑M2/89‑1 (MQ=255)

                                                                                         tGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCAGAGTTAACGAGATTtcttct   <  1:2645771‑M2/90‑1 (MQ=255)

TCTAGGATAGATACTCATTGTATAATAATTATTCACTAGAACAAAAAAACACACATCAATTTGGTTGTTTCCATCCAAAATAATGTGTGTGTTTATACATATATGATTAATTACTAAACTTCATCGTTTATCAATATTAAATCCATTGATGCGATGTTCAGAGTTAACGAGATTTCTTCTG  >  USA300TCH1516_ALE/2032499‑2032679

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.