| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2740979 | 148 (0.780) | 18 (0.110) | 13/132 | NT | 12.6% | intergenic (+21/+60) | yhdG_2/USA300HOU_RS14115 | putative amino acid permease YhdG/Isoleucine 2‑epimerase |
| ? | USA300TCH1516_ALE | = 2741001 | 127 (0.810) | intergenic (+43/+38) | yhdG_2/USA300HOU_RS14115 | putative amino acid permease YhdG/Isoleucine 2‑epimerase | |||||
Only 100 of 207 total aligned reads displayed.
GACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGATCTAAGTTACCTGCTTCCAAAG > USA300TCH1516_ALE/2740912‑2741091 | gACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTg > 1:2404301‑M2/1‑90 (MQ=255)gACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTg < 2:1220477‑M2/91‑2 (MQ=255) aCATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTgg < 1:3219543‑M2/91‑3 (MQ=255) aCATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTgg < 1:3668223‑M2/91‑3 (MQ=255) aCATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTgg > 1:13293‑M2/1‑89 (MQ=255) aCATTCTAAGAAAAATGAAGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTGCCCATCTGATTAACATCCAGATGTgg > 2:3215951‑M2/1‑89 (MQ=255) aCATTCTAAAAAAAATGACGTAGCTAAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGTTTAACATCCAGATTTgg > 2:2522826‑M2/1‑89 (MQ=255) cATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTgga > 1:1775423‑M2/1‑88 (MQ=255) aTTGTAAGAAGAATGAAGTAAATGAATACAAAAAAAAAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGaa < 2:2317891/91‑1 (MQ=255) aTTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTggaa < 2:303828‑M2/91‑5 (MQ=255) aTTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTggaa < 1:198529‑M2/91‑5 (MQ=255) tAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTggaaatga > 1:3544805‑M2/1‑83 (MQ=255) aaGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTggaaatgat < 1:881931‑M2/91‑10 (MQ=255) aaGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTggaaatgat < 2:548971‑M2/91‑10 (MQ=255) gAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCACCTGACTAACATCCAGATGCggaaatgattt < 2:1380222‑M2/91‑12 (MQ=255) aaaaaTGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTggaaatgatttt > 1:2130869‑M2/1‑79 (MQ=255) aaaaaTGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTggaaatgatttt > 1:3027410‑M2/1‑79 (MQ=255) aaaaTGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTggaaatgattttt < 2:2450110‑M2/91‑14 (MQ=255) aaaaTGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTggaaatgattttt < 2:3115019‑M2/91‑14 (MQ=255) aaTGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTtttta > 2:3338053/1‑91 (MQ=255) tGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttatt < 2:2399582/91‑1 (MQ=255) tGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttatt > 1:2502594/1‑91 (MQ=255) tGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttatt > 2:11959/1‑91 (MQ=255) tGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttatt > 2:376952/1‑91 (MQ=255) gACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttattt > 2:154551/1‑91 (MQ=255) aCGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttatttt > 2:2720982/1‑91 (MQ=255) aCGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttatttt > 1:612958/1‑91 (MQ=255) cGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttattt > 2:930470/1‑89 (MQ=255) aGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTatat < 2:1368007/91‑1 (MQ=255) cTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTa < 1:1616388/91‑1 (MQ=255) tACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATa < 1:982883/91‑1 (MQ=255) ccacccacCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAAt < 2:1265284/91‑1 (MQ=255) cccaccAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGc < 1:2899732/91‑1 (MQ=255) cccaccAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGc < 1:663839/91‑1 (MQ=255) ccaccaAAATAAAAAATAAAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGc > 2:508282/1‑91 (MQ=255) ccaccaAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCt > 2:2224547/1‑91 (MQ=255) ccaccaAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCt < 1:811081/91‑1 (MQ=255) caccaAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTa < 2:2282501/91‑1 (MQ=255) caccaAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTa < 2:1069743/91‑1 (MQ=255) ccaAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTAtt > 2:2237130/1‑91 (MQ=255) ccaAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTAtt > 1:3044053/1‑91 (MQ=255) ccaAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTAtt < 2:3522044/91‑1 (MQ=255) ccaAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTAtt < 2:3668223/91‑1 (MQ=255) caAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTa < 1:1214885/91‑1 (MQ=255) aaataaaaaat‑aaaAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTAcc < 1:2722749/91‑1 (MQ=255) aaataaaaaat‑aaaAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTAcc < 2:1580483/91‑1 (MQ=255) ataaaaaat‑aaaaaAAATCATTTCCCATCTGATTAACATCCAGATGTggaaatgattttttattttatattttggtgggtggtattcagct < 2:577982‑M2/91‑45 (MQ=255) taaaaaat‑aaaaaaAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAAc > 2:2130935/1‑91 (MQ=255) aaaaaat‑aaaaaaAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAAcc < 1:1653737/91‑1 (MQ=255) aaaaaat‑aaaaaaAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAAcc < 2:2236937/91‑1 (MQ=255) aaaaaat‑aaaaaaAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAAcc < 2:1312587/91‑1 (MQ=255) aaaaat‑aaaaaaAATCATTTCCCATCTGATTAACATCCAGATGTggaaatgattttttattttttattttggtgggtggtattcagctacg < 2:2841494‑M2/91‑48 (MQ=255) aaaaat‑aaaaaaAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCt < 1:1000878/91‑1 (MQ=255) aaaat‑aaaaaaAATCATTTCCCATCTGATTACCATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCt > 2:2969086/1‑79 (MQ=255) aaaat‑aaaaaaAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCt < 1:2968300/79‑1 (MQ=255) aaat‑aaaaaaAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTg > 2:3544416/1‑91 (MQ=255) aat‑aaaaaaAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGt < 2:2495168/91‑1 (MQ=255) aat‑aaaaaaAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGt > 2:3231/1‑91 (MQ=255) aat‑aaaaaaAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGt < 2:2150335/91‑1 (MQ=255) at‑aaaaaaAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTc < 2:1869067/91‑1 (MQ=255) at‑aaaaaaAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTc < 2:765435/91‑1 (MQ=255) t‑aaaaaaAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTcc < 2:911606/91‑1 (MQ=255) t‑aaaaaaAATCATTTCCCATCCGATTAACATCGAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTCTTACCAACCTTGTcc < 1:3303783/91‑1 (MQ=255) aaaaaaaaaTCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTcc < 2:3002058/90‑1 (MQ=255) aaaaaaTCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGa > 2:58230/1‑91 (MQ=255) aaaaaTCATTTCCCATCTGATTAACATCCAGATGTggaaatgattttttttattttttattttgtttggttttatttatcttcgttatttt < 2:1682859‑M2/91‑57 (MQ=255) aaaaaTCATTTCCCATCTGATTAACATCCAGATGTggaaatgattttttttattttttattttggtgggtggtattcagctacgtcatttt < 1:502668‑M2/91‑57 (MQ=255) aaaaTCATTTCCCATCTGATTAACATCCAGATGTggaaatgattttttttattttttatttttttttttggtattcagctacgtcattttt < 2:1414764‑M2/91‑58 (MQ=255) aaaaTCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGata > 1:2360960/1‑91 (MQ=255) aaaaTCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGata < 1:2059076/91‑1 (MQ=255) aaaaTCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGata < 2:2602662/91‑1 (MQ=255) aaaTCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGatat > 1:3758827/1‑91 (MQ=255) aatgaTTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCGTGTCCAGATATg < 1:3001759/87‑1 (MQ=255) aaTCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATg < 2:3291249/91‑1 (MQ=255) aaTCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATg > 2:2656081/1‑91 (MQ=255) tCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTc < 1:2790911/91‑1 (MQ=255) aTTTCCCATCTGATTAACATCCAGATGTggaaatgatttttttcattttttattttggtgggtggtattcagctacgtcatttttcttaga < 2:2991804‑M2/91‑64 (MQ=255) tttCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCata > 1:3396390/1‑91 (MQ=255) tttCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCata > 1:1872883/1‑91 (MQ=255) tttCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATAACCAACCTTGTCCAGATATGTCata > 1:3620344/1‑91 (MQ=255) ttCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCatat > 1:2317211/1‑91 (MQ=255) ttCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCatat > 1:1017619/1‑91 (MQ=255) tCCCATCTGATTAACATCCAGATGTggaaatgattttttattttatattttggtgggtggtattcagctacgtcatttttcttagaatgtc < 1:1690358‑M2/91‑67 (MQ=255) aTTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGATCTAAGt < 1:1486278/91‑1 (MQ=255) aaCATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGATCTAAGTTAc < 2:812155/91‑1 (MQ=255) cATCCAGATGTGGGAATGATTTTTTATTTTATATTAAGATAATGGCTATTACCAACCTTGTCCAGATATGTCATATTGATCTAAGTTACCt < 1:3875746/91‑1 (MQ=255) cATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGATCTAAGTTACCt < 1:1079975/91‑1 (MQ=255) ccAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGATCTAAGTTACCTGCt > 2:2027494/1‑91 (MQ=255) ccAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGATCTAAGTTACCTGCt < 2:3767753/91‑1 (MQ=255) cAGATGTggaaatgattttttttattttttattttggtgggtggtattcagctacgtcatttttcttagaatgtctaagtccataacttaa < 1:3787106‑M2/91‑85 (MQ=255) cAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGATCTAAGt < 2:2964004/82‑1 (MQ=255) cAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGATCTAAGTTACCTGCtt > 2:2253520/1‑91 (MQ=255) aGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGATCTAAGTTACCTGCTTc < 1:525243/91‑1 (MQ=255) aGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGATCTAAGTTACCTGCTTc < 1:3090630/91‑1 (MQ=255) aGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGATCTAAGTTACCTGCTTc < 1:757186/91‑1 (MQ=255) aTGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGATCTAAGTTACCTGCTTCCa < 2:3089633/91‑1 (MQ=255) tgtgGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGATCTAAGTTACCTGCTTCCaa > 1:3718681/1‑91 (MQ=255) tgtgGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGATCTAAGTTACCTGCTTCCaa < 2:881931/91‑1 (MQ=255) gtgGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGATCTAAGTTACCTGCTTCCaaa < 1:119079/91‑1 (MQ=255) tgGAAATGATTTTTTATTTTATATTAATATAATTGCTATTACCAACCTTTTCCATATATTTCATATTGATCTAAGTTACCTGCTTCCAAAg > 2:2809108/1‑91 (MQ=255) | GACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑AAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGATCTAAGTTACCTGCTTCCAAAG > USA300TCH1516_ALE/2740912‑2741091 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |