| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | = 2352 | 1 (0.630) | 6 (0.010) | 5/258 | 70.3 | 0.63% | intergenic (+132/+36) | USA300HOU_pUSA300HOUMR0003/USA300HOU_pUSA300HOUMR0004 | hypothetical protein/hypothetical protein |
| ? | NC_012417 | = 1963 | 1902 (1.080) | intergenic (+196/+130) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 158 total aligned reads displayed.
AACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000731/2272‑2352‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttaagggttc‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < NC_012417/1963‑1824 AACTTGCAGACGAATGTCGACATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAA > 1:593904/1‑141 CTTGCAGACGAAAGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATA < 2:312807/141‑1 CAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTCTTTTTTATTATCTTCATGATAATCATct > 2:768442/1‑139 gtctagcTAAGGGATC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCATCGCCTATGTTTTATTATCTTCATGATAATCAAATCTTTCTTCCATCTCCTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAACA > 2:60662/8‑141 aggtcatGGTTC‑‑‑TCTTCAACATCTATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAA < 2:559337/134‑1 tttgAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTAAAAAGCATCATCTTTATAAAAAAACAAAAAGTAACCAACAAC > 2:70636/5‑141 gcTAAGTGTGC‑‑‑TTCTCAACATCAATAAATTTTGTCGGCATAATTGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCTTCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCATCAAC < 2:280708/139‑1 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAGTTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTATTCCATCTCGTCAACAACATCATCTTTATAGAAAAACAAAAAGTATGCAACAAa > 2:552754/1‑140 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCTATCTTGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC > 2:390366/1‑141 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATATAAAAACAAAAAGTAAGCAACAAC > 1:175907/1‑141 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAATTAAGCAACAAa > 2:264027/1‑140 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAa > 2:978660/1‑140 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC > 2:996747/1‑141 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC < 1:737051/141‑1 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC > 1:855627/1‑141 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC < 1:909902/141‑1 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC > 1:942923/1‑141 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC > 2:154193/1‑141 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC > 1:327851/1‑141 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATATTTTTAAAAAAACAAAAAGTAAGCAACAAC > 2:645058/1‑141 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTAAATTTTATAAACTTCATGATAATAATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCATCAAa > 2:52971/1‑140 GTTAAGGGTCC‑‑‑TTCTCAACATCAATAAATTTTCCCGGCATAAAAGCGTTGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTCCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC < 1:768327/141‑1 gTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACA < 1:836107/140‑1 TTAAGGTTTT‑‑‑GTCTCAACATCAATAATTTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATACTCATATTTTTCTTCCATCTCGTCAAAAGCAGCATCTTTATAGAACAACAAAAAGTAAGCAACAACA < 1:760326/141‑1 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCACAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACA > 2:777251/1‑141 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACc > 2:75995/1‑140 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACA < 1:871753/141‑1 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACA < 2:614580/141‑1 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACA > 1:45809/1‑141 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACA < 1:403048/141‑1 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACA < 1:160796/141‑1 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATACAAAAACAAAAAGTAAGCAACAACA > 2:781716/1‑141 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAAAAAAACAAACAGTAAGAAAAAACc > 2:688765/1‑140 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTCTATATAAAAACACAAATTAAGCAACAACA > 2:807339/1‑141 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCACCATCTTTATAGAAAAACAAAAAGTAAGCAACAACA > 1:45874/1‑141 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCACTCCGTCAAACACATCATCTTTATAGAAAAACAAAAAGGAAGCAACAACA > 2:81249/1‑141 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGCCGTCTATTTTGTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACA < 2:673259/141‑1 TTAAGGGTTC‑‑‑TTCTAAACAACAATAAATTATCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTAAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACA < 1:40070/141‑1 TTAAGGGTTC‑‑‑TTCCTAACATCAATAAATTTACGCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACA < 1:265249/141‑1 TAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGCTAATGATATTTTTGTTCCATCTCGTCGCCGGCTTCTTCTTTATAAAAAAAAAAAAAGTAAGCAACAACAC < 2:663111/141‑1 TAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCTTCTCGTCAAAAGCATCATCTTTATAGAAAAACTAAAAGTAAGCAACAACAC > 1:316649/1‑141 TAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACAC < 1:633560/141‑1 AAGTGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATTCTTCTTCTATTTTTTATTATCTTCATTATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACC < 2:350391/141‑1 AAGGGTTC‑‑‑TTCTCAACATCAATAACTTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACC < 1:791387/141‑1 AAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACC > 1:268669/1‑141 AAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACC < 1:446202/141‑1 AAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACC < 1:168309/141‑1 AAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACC < 1:698430/141‑1 AAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACC > 2:927730/1‑141 AAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACC < 2:337840/141‑1 AAGCGTTC‑‑‑TTCTAAACATCTCTAAAGGTGCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCAGCTTTATAGGAAAACAAAGATTAAGCAACAACACC < 2:949309/141‑1 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCA > 1:86877/1‑141 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCA > 1:852021/1‑141 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCA > 1:985362/1‑141 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCA > 2:487292/1‑141 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCA > 1:645798/1‑141 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCA > 1:361169/1‑141 AGGGTTC‑‑‑TTCTCAACATCAATAAACTCCGCCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAAACCA > 1:480977/1‑141 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTTCTTTTTTTCAAAAGCATCATCTTTATAGAAAAACAAAAAATAAACAACAACACCAA > 2:395582/1‑141 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAt > 2:606588/1‑140 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAA > 1:30467/1‑141 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAA < 1:308154/141‑1 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAA > 2:946575/1‑141 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAA < 1:129422/141‑1 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAA > 1:781326/1‑141 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGAAACAACACCAA > 1:717534/1‑141 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCGTTATAGAAAACCAAAAAGTAAGCAACAACACCAA > 2:946571/1‑141 gcTTC‑‑‑TTCTCAACATCCATCAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAAT < 2:777667/139‑1 GGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAAT < 2:915662/141‑1 GGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAAT < 1:450870/141‑1 GGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAAT < 1:247617/141‑1 GGTTC‑‑‑TCCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAAT < 1:374529/141‑1 gtaC‑‑‑TTCCCAACAGCAATAAATTTTCTCGGAATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTAAAAAAAAAAAAAAAGTAAGCAACAACACCAATA < 2:542352/138‑1 GTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATACATGCGTCGTCTATTTTTTATTATCTTAATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAATAAGTAAGAACCACAATA > 2:472798/1‑141 GTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATA < 2:129324/141‑1 GTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATA < 2:894406/141‑1 GTTC‑‑‑TTCTCAACATCAATAAATTGTCTCTGCATAAATGCGGCGTCTATTTGTTATTATCTTCACGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCAGCTTTATACAAAAACAAAAAGTAAGCAACAACACCAATA < 2:967428/141‑1 TTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAG < 1:240683/141‑1 TC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATCTTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGAAACAACACCAATAGG > 1:274875/1‑141 TC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAGACAAAAAGTAAGCAACAACACCAATAGa > 1:562314/1‑140 TC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACATCCCCAATAGG > 2:638936/1‑141 TC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGG > 1:152733/1‑141 TC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGG > 2:142397/1‑141 TC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGG > 1:737712/1‑141 TC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGG > 1:856924/1‑141 TC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGG > 1:120862/1‑141 TC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAAAAACACCAATAGG > 2:862223/1‑141 TC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAAAAAAAAGTAAGCAACAACACCAATAGG > 1:664032/1‑141 TC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTATTTATTATCTTCATAATAATCATATTTTTCTTCCATCTCGTCGAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGAAACAACACCAATAca > 2:650118/1‑139 C‑‑‑TTCTCAACATCAATATATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA > 1:492908/1‑141 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA > 1:485450/1‑141 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < 1:737600/141‑1 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA > 1:625251/1‑141 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA > 1:610807/1‑141 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < 1:217146/141‑1 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < 1:362647/141‑1 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA > 1:748935/1‑141 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGAATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < 1:938795/141‑1 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATCTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA > 2:111281/1‑141 C‑‑‑TTCACAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCAACATAATAATCATATTTATCTTCCATCTCGTCAAAAGCACCATATTTATAGAAAAACAAAAAGTAAGCTACAACACCAAaaaaa < 2:495481/141‑6 AACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000731/2272‑2352‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttaagggttc‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < NC_012417/1963‑1824 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |