| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | = 4419 | 11 (2.610) | 25 (0.020) | 16/254 | 0.0 | 2.0% | intergenic (+384/‑81) | USA300HOU_pUSA300HOUMR0006/cadR | hypothetical protein/cadmium binding protein |
| ? | NC_012417 | = 1946 | 2408 (0.870) | intergenic (+179/+147) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 241 total aligned reads displayed.
CGCATTTATGCCGA‑AAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000731/4275‑4419‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaataaaTTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTGA < NC_012417/1946‑1807 TTTATGCCGAGAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAA < 1:368008/141‑1 AATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAATTTTCTCGGCATA > 4:138600/1‑141 ATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAATTTTCTCGGCATAAATGCGTCG > 3:104074/1‑141 ATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAATTTTCTCGGCATAAATGCGTCG > 2:615952/1‑141 GAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑T > 1:70195/1‑141 AGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTT > 3:278224/1‑141 AGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAA < 2:438073/110‑1 AGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAA > 1:438073/1‑110 TAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAAT > 2:597320/1‑99 TAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTC < 2:657346/96‑1 AAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAA‑GCAATTGGAATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGA > 1:397632/1‑141 TCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAAT > 2:473890/1‑77 ATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAA < 1:223106/74‑1 TAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAA‑GCAATTGGAATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTC > 3:381871/1‑141 cgctatGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGC > 2:720364/7‑141 GCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATC < 4:106643/141‑1 CGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAAT < 1:942526/53‑1 ACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATT‑GGAATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTAT > 1:220837/1‑141 GTCAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAA < 1:656623/141‑1 taAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAAC < 2:761986/139‑1 aCAATAAATTTTCTCGGCATAAATGCGACGTCTA‑TTTTTTATTATCTTCATGATAATAAAAAATTTAAAAAAACTCGTCAAAAGCATCATCTTTAAAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAAC < 2:543760/140‑1 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAAa > 4:350743/1‑140 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAAC < 1:901624/141‑1 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAAC > 1:576651/1‑141 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAA > 1:447097/1‑83 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAA < 2:447097/83‑1 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGAGAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAAC > 1:524085/1‑141 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTT > 2:133703/1‑40 aAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACA < 2:790372/140‑1 CAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAAac > 3:311252/1‑139 CAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACA < 2:350073/141‑1 CAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACA > 3:255107/1‑141 CAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACA > 2:742171/1‑141 CAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACA < 1:500192/141‑1 CAATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACA > 3:59206/1‑141 AATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAG > 2:383082/1‑141 AATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAG > 1:1010663/1‑141 AATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAG > 1:882268/1‑141 AATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAG > 1:687780/1‑141 AATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAG < 3:340005/141‑1 AATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAG < 1:622448/141‑1 AATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAG > 3:357311/1‑141 AATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAG < 1:510473/141‑1 AATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAACAATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAG > 3:96097/1‑141 AATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTAAAAAGCATCCTATTTATTGAAAAAAAAACATGAAAAAACAACACCAATAAGAATAAAAAAACAa > 3:84734/1‑140 AATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAAT > 1:958246/1‑55 AATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAAT < 2:958246/55‑1 ATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCTTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGc > 1:114740/1‑140 ATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGa > 2:326822/1‑140 ATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGT > 2:931502/1‑141 ATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGT > 3:32016/1‑141 ATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGT > 4:439092/1‑141 ATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGT > 1:213112/1‑141 ATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGT > 1:743400/1‑141 ATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGT > 1:731302/1‑141 ATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGT < 1:710452/141‑1 ATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGC > 2:250239/1‑112 ATAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTT > 4:126906/1‑37 TAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTG > 2:215858/1‑141 TAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTG < 4:117979/141‑1 TAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAAAAAAAAAACAGTG < 1:847211/141‑1 TAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAAAAGGAATAAAAAAACAGTG < 2:77144/141‑1 TAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAAAAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTG < 2:856575/141‑1 TAAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT > 3:108415/1‑83 AAATTTTCTCGGCATGAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATGTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT < 4:37408/141‑1 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTTTTTTTTTTTTTCAAAAGCATCATCTTTATAGAAAAACAAAAATTATGCAACAACACCAATAGGAATATAAAAACAGTGT > 4:221942/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCTTCAAAAGCATCATCTTTATAG‑AAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTG > 2:415157/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT > 4:417639/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT > 3:309985/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT > 1:642084/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT < 1:552640/141‑1 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT < 1:473903/141‑1 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT > 3:404613/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT > 3:416705/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT < 3:200285/141‑1 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT < 3:14544/141‑1 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT > 3:143210/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT > 4:153756/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT > 2:881516/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT > 2:106100/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT < 2:153963/141‑1 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT > 2:686861/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT < 2:319451/141‑1 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT > 2:431921/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAAAAGTat > 4:227406/1‑139 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAATAAGCAAAAACACCAATAGAAATAAAAAAACAGTGT > 1:31859/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGA < 2:557853/94‑1 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATA > 1:815385/1‑50 AAATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATA < 2:815385/50‑1 AAATTTTCTCGGCATAAATGCGTAGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGACAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAAGAACACCAAAAGAAATAAAAAAACAGTGT < 2:503958/141‑1 AAATTTTCTAGGCATAAATACATCGTCTA‑TTATTTATTATCTTCAAAATAATCATATTTTTCTTCCATCTCGTCAAAAGCAACATCTTTAAAGAAAAACAAAAAGTCAGCAACAACACCAAAAAAAAAAAAAAAACAGTGT < 4:272116/141‑1 AATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAATTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTG > 4:181250/1‑141 AATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTG < 1:337569/141‑1 AATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTG < 1:738153/141‑1 AATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTG < 1:838939/141‑1 AATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTG < 1:107431/141‑1 ATTTTCTCGGCATAAATGCGTCGTCTATTTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTG < 1:172806/141‑1 ATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTGA > 1:36887/1‑141 ATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTGA < 1:152140/141‑1 ATTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTAAAAAAAAAAAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTGA < 2:609966/141‑1 CGCATTTATGCCGA‑AAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000731/4275‑4419‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaataaaTTTTCTCGGCATAAATGCGTCGTCTA‑TTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTGA < NC_012417/1946‑1807 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |