Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000731	11612	11670	59	2 [1]	[1] 2	USA300HOU_pUSA300HOUMR0014	recombinase

GGATTTAATCACGTTAGTTAATGAACTTAACGAACGAGGTGTGAGTTTTCATAGTTTAGAAGAAAATATAACGATGGATAAATCAAGTTCTACAGGACAATTATTATTTCATTTATTCGCAGCATTTGCAGAGTTTGAACGTAATTTAATTT  >  CP000731/11471‑11622                                                                                                                                             |            ggaTTTAATCACGTTAGTTAATGAACTTAACGAACGAGGGGTGAGTTTTCATAGGGTAGAAGAAAGGATGACTGGGGATAGATCAAGTTCTACAGGACAATTAGTATTTCATTTATTCGCAGCATTGGCAGAGTTTGAACg             >  1:257946/1‑141 (MQ=255)            cGTTAGCTAATGAACTTAACGAACGGGGTGTGAGTCTTCATAGTTTAAAAGAAAATATAACGATGGATAAATCAAGTTCTACAGGACAATTATTATTTCATTTATTCGTAGCATTTGCAGAGTTTGAACGTaatttaattt  >  2:969676/1‑141 (MQ=255)                                                                                                                                             |            GGATTTAATCACGTTAGTTAATGAACTTAACGAACGAGGTGTGAGTTTTCATAGTTTAGAAGAAAATATAACGATGGATAAATCAAGTTCTACAGGACAATTATTATTTCATTTATTCGCAGCATTTGCAGAGTTTGAACGTAATTTAATTT  >  CP000731/11471‑11622

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑