| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 1999809 | NA (NA) | 7 (0.060) | 3/268 | 9.3 | NA | intergenic (‑1537/+1798) | USA300TCH1516_01882/USA300TCH1516_01883 | tRNA‑Val/tRNA‑Ala |
| ? | USA300TCH1516_ALE | = 2177978 | NA (NA) | intergenic (+1740/+3555) | ilvA/USA300TCH1516_02069 | L‑threonine dehydratase biosynthetic IlvA/tRNA‑Gly | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
GGGGTCATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/1999664‑1999809‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagacATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTCGGC < USA300TCH1516_ALE/2177978‑2177839 GGGGTCATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCG < 1:1076304/141‑1GGGGTCATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCG > 2:784061/1‑141GGGGTCATTTTGCCGAGTTCCTGAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGCGAAATCAACGACTCG < 1:397777/141‑1GGGGTCATTTTGCAGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCCTCTTGACTGCCTGTGTCGGTTTGCGGGAGGGGCACCTATTTTCTCTCTAGTGGCTTTTTTCGGCAGTGTGTAATCATCGAATCG > 2:538198/1‑141GGGGTCATGTTGCCGCGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTTTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCG < 2:145176/141‑1 GGGTCATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGA < 2:1301887/141‑1 GGGTCATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGA > 1:1090817/1‑141 GGGTCATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGA < 1:934218/141‑1 GGGTCATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGA > 1:799177/1‑141 GGGTCATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGA < 1:1219173/141‑1 GGGTCATTTTGCCGAGGTCCTTAACGAGAGTTCGCTCGCTCCCCTTAGAATTCTCATCTTGACTACCTGTGGCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGA < 2:1296608/141‑1 GGGGCATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGATTTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCCCCTCTTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGA < 1:718119/141‑1 gtgATTTTGGGGGGTTCCTTAACGAGAGTTCGCGCGCTTCTCTTGGATTTCTTATCTTGACTACCTGTGTGGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAG < 2:74181/138‑1 GTCATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAG < 1:298741/141‑1 GTCATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAG > 1:536083/1‑141 GTCATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAG < 1:951800/141‑1 GTCATTTTGCCGAGTTCCTTAACGACAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAG < 2:1257589/141‑1 TCATTTTGCCGGGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAGA < 2:1289881/141‑1 TCATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAGA < 2:1138050/141‑1 TCATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAGA < 2:1221358/141‑1 TCATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAGA < 1:1136265/141‑1 TCATTTGGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAGA < 1:1133550/141‑1 CATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTTTCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAGAC > 1:1076455/1‑141 cTTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAGACA < 1:59066/140‑1 atcTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAGACA < 1:785244/138‑1 atcTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAGACA < 1:291635/138‑1 ATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAGACA < 2:1090050/141‑1 TTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAGACATTG < 1:318895/141‑1 GCCGAGATCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTGGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAGACccaacg > 2:1188241/1‑135 TCGCTCACCTTAGAATTCTCACCTTGACTACCTGTGTCGGTTTGCGGTAAGGGCACCTATTTTCTATCTAGTGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAGACATTGTGTCTTCGAGTCGTTGATTTCACACTG < 2:519019/141‑1 tgtgTTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGTACCTATTTTCTATCTAGAGGATTTTCGCGGCCGTGTGAAATCAACGCCTCGAAGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGC < 2:567432/137‑1 gtAGACATTGTGCCCTCGAGTCGTTGACGTCACACTGCCTAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAAC < 1:343642/139‑1 gagGACATTGGGGCTTCGAGTCGTTGCTTGCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACTGACACAGGTAGGCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAAC < 2:78219/138‑1 cAAGACCTCGTGTCTCCGAGTCTCTGATTGCCCACTGCCGAGAAAAGACTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCTACACATGTAGTCAAGATGAGAAGTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAcc < 2:309659/140‑3 aatttCATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAAC < 2:1017802/136‑1 aAAGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAAC < 1:446056/140‑1 GAAGGCACTGTGTCTTCGAGTCGTTGATTCCCCACTGCCGAGAAAAGCCTCTAGCTAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAAC < 2:445543/141‑1 GAAGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAAC < 1:604821/141‑1 GAAGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAAC < 1:198815/141‑1 GAAGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAAC < 1:1154555/141‑1 GAAGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAAC > 1:820135/1‑141 GAAGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAAC < 1:1105469/141‑1 GAAGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAAC < 2:427538/141‑1 GAAGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGAACGAAAATAGGTGCCCGTACCGCAAACCGCCACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAAC < 2:794444/141‑1 GAAGACATGGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAAC < 2:562132/141‑1 GAAGACAGTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAATATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCTAGCGAACTCTCGTTAAGGAAC < 1:701810/141‑1 AAGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACT < 2:1204323/141‑1 AAGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACT < 2:313517/141‑1 AAGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACT < 2:235862/141‑1 AAGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACT < 2:1334173/141‑1 AAGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCGCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACc > 1:869535/1‑140 AAGACATTGTGTCTTCGAGCCGTGGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAGAGTAGGGGCCCGTACCGCAAACCGACACAGGTAGCCAAGATGAGAAGTCGAAGGTGGGCGAGCGAGCTCCGGTTAGGGAACg > 2:315585/1‑140 AAGACATTGTGTCCTCGAGGCGTTTATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACT < 1:69799/141‑1 AAGACATTGTGGCTTCGAGTCGGTGGTTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACT < 1:644181/141‑1 AAGACATTGGTGCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAACATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAATGTGAGCGAGCGAACTCTCGTTAAGGAACT < 2:91972/141‑1 AAGACATTGGGTCATCGAGTAGTTGAGTTCACACTGCCGAGAAAAGCCGCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACT < 2:5644/141‑1 AGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTGGATAGAAAATAGGTGCCCGTACCGCAAACCGACACCGGCAGTCCATACGAGAAGTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTC > 1:777700/1‑141 AGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTC > 1:1041851/1‑141 AGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTC > 1:356685/1‑141 AGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTC > 1:430105/1‑141 AGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTC > 1:508386/1‑141 AGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTATCGTTAAGGAACTC > 1:1377771/1‑141 AGACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGGGAGCGAGCGAACTCTCGTTAAGGAACTC > 2:490008/1‑141 ACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTCGG > 2:596459/1‑141 ACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTCGG > 2:981033/1‑141 ACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTCGG > 2:328318/1‑141 ACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTCGG > 1:997462/1‑141 ACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTCGG < 1:74608/141‑1 ACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTCGG > 1:737678/1‑141 ACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTATCGTTAAGGAACTCGG > 1:683240/1‑141 ACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGCCAAGATTAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTCGG < 1:1068691/141‑1 ACATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGAGAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTCGG > 1:1312603/1‑141 ACATTGTGTCTTCGAGTCGTTAATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTCGG > 1:709772/1‑141 ACATTGTGTCTTCGAGGCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTCGG > 1:678713/1‑141 CATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTCGGC > 2:1224576/1‑141 CATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTCGGC < 2:1015264/141‑1 CATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTCGGC > 1:1106053/1‑141 CATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGGGAGCGAGGGAACTCTCGTTAAGGAACTAGGC > 2:284585/1‑141 CATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCCGATGATATAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTCGGC > 1:1068627/1‑141 CATTGTGTCTTCGAGTCAACGGTCTCACACTGCCGAGAAAAGCCTCTAGATAGAAGCTAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTCGGC > 1:660027/1‑141 GGGGTCATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGTTTGCGGTACGGGCACCTATTTTCTATCTAGAGGCTTTTCTCGGCAGTGTGAAATCAACGACTCGAAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/1999664‑1999809‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagacATTGTGTCTTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCCTCTAGATAGAAAATAGGTGCCCGTACCGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCGTTAAGGAACTCGGC < USA300TCH1516_ALE/2177978‑2177839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |