Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	754591	754628	38	2 [1]	[1] 2	USA300HOU_RS03685	hypothetical protein

TCGTTTATCTAATAGTTGTTGAATATTTTTGGAATTGTATATCTTCCCATTATGATGCATGACAATTAAGACTTTGTCGACTAATAAACTTGCGAGTCCATAATCTTGAGTGACTACGATATCATCCTTCGTTGATAATTGAACAATTTTGTAATCAACTGCATC  >  USA300TCH1516_ALE/754450‑754614                                                                                                                                             |                         tCGTTTATCTAATAGTTGTTGAATATTTTTGGAATTGTATATCTTCCCATTATGATGCATGACAATTAAGACTTTGTCGACTAATAAACTTGCGAGTCCATAATCTTGAGTGACTACGATATCATCCTTCGTTGATAATTg                          <  2:60093/141‑1 (MQ=255)                         atTTTTGGAATTGTATATCTTCCCATTATGATGCATGACAATTAAGACTTTGTCGACTAATAAACTTGCGAGTCCATAATCTTGAGTGACTACGATATCATCCTTCGTTGATAATTGAACAATTTTGTAATCAACTGCATc  <  1:20472/141‑1 (MQ=255)                                                                                                                                             |                         TCGTTTATCTAATAGTTGTTGAATATTTTTGGAATTGTATATCTTCCCATTATGATGCATGACAATTAAGACTTTGTCGACTAATAAACTTGCGAGTCCATAATCTTGAGTGACTACGATATCATCCTTCGTTGATAATTGAACAATTTTGTAATCAACTGCATC  >  USA300TCH1516_ALE/754450‑754614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑