Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	872029	872057	29	2 [1]	[1] 2	USA300HOU_RS04260	hypothetical protein

TGCAATAGAGGTTTTATTGGGGAAGGATAAAGTCATTCAGAAAAAATACGTGCATATTTTACCTAGTAAAGAAGGGTACATGTTACCAATTAATAAAAATGTGTACGAAGAATTAGAAAGAACGATTGAGAACAATGGTCATGA  >  USA300TCH1516_ALE/871888‑872031                                                                                                                                             |    tGCAATAGAGGTTTTATTGGGGAAGGATAAAGTCATTCAGAAAAAATACGTGCATATTTTACCTAGTAAAGAAGGGTACATGTTACCAATTAATAAAAATGTGTACGAAGAATTAGAAAGAACGATTGAGAACAATGGTCa     <  1:9408/141‑1 (MQ=255)    aaTAGGGGTTTTATTGGGGAAGGATAAAGTCATTCAGAAATAATACGTGCATATTTTACCTAGTAAAGAAGGGTACATGTTACCAATTAATAAAAATGTGTACGAAGAATTAGAAAGAACGATTGAGAACAATGGTCATGa  <  2:49512/141‑1 (MQ=255)                                                                                                                                             |    TGCAATAGAGGTTTTATTGGGGAAGGATAAAGTCATTCAGAAAAAATACGTGCATATTTTACCTAGTAAAGAAGGGTACATGTTACCAATTAATAAAAATGTGTACGAAGAATTAGAAAGAACGATTGAGAACAATGGTCATGA  >  USA300TCH1516_ALE/871888‑872031

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑