Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ USA300TCH1516_ALE 911241 911304 64 2 [1] [1] 2 USA300HOU_RS04510 hypothetical protein

CCAATGATTAATCCACCAAAGAAAAACATAGTTGGAATATGGTGTTGGCTTAATAAATAATTAAAAAGATTACTTAGTGATCCCATTGCCAGTAACATTCCAATTATAATGGGGATTAAAAATGTAAAACTTGGCCAAAAACGTCGT  >  USA300TCH1516_ALE/911100‑911246
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ccAATGATTAATCCACCAAAGAAAAACATAGTTGGAATATGGTGTTGGCTTAATAAATAATTAAAAAGATTACTTAGTGATCCCATTGCCAGTAACATTCCAATTATAATGGGGATTAAAAATGTAAAACTTGGCCaaaaa        >  2:14927/1‑141 (MQ=255)
      atttaTCCACCAAAGAAAAACATAGTTGGAATATGGTGTTGGCTTAATAAATAATTAAAAAGATTACTTAGTGATCCCATTGCCAGTAACATTCCAATTATAATGGGGATTAAAAATGTAAAACTTGGCCAAAAAcgtcgt  >  2:50407/5‑141 (MQ=255)
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CCAATGATTAATCCACCAAAGAAAAACATAGTTGGAATATGGTGTTGGCTTAATAAATAATTAAAAAGATTACTTAGTGATCCCATTGCCAGTAACATTCCAATTATAATGGGGATTAAAAATGTAAAACTTGGCCAAAAACGTCGT  >  USA300TCH1516_ALE/911100‑911246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: