Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	911241	911304	64	2 [1]	[1] 2	USA300HOU_RS04510	hypothetical protein

GCGATAGTCCCACCGCTAACACCAGGTACCAAGTCACTCGTTCCCATAGCAAAACCTTTTAGAATATTAATCCATTTAAATTGTTGCATGAATAACTCCTTTCAAACGATTGGAATAAAATCATAAATAGCATCATACCATATTA  >  USA300TCH1516_ALE/911301‑911445     |                                                                                                                                             gCGATAGTCCCACCGCTAACACCAGGTACCAAGTCACTCGTTCCCATAGCAAAACCTTCTAGAATATTAATCCATCTGAATTTATTTTGGAAGAACTCCTTTCAAACGATTGGAATAAAATCATAAATAGCATCATACCat      >  1:22492/1‑141 (MQ=255)     tAGTCCCACCGCTAACACCAGGTACCAAGTCACTCGTTCCCATAGCAAAACCTTTTAGAATATTAATCCATTTAAATTGTTGCATGAATAACTCCTTTCAAACGATTGGAATAAAATCATAAATAGCATCATACCATATTa  <  2:37602/141‑1 (MQ=255)     |                                                                                                                                             GCGATAGTCCCACCGCTAACACCAGGTACCAAGTCACTCGTTCCCATAGCAAAACCTTTTAGAATATTAATCCATTTAAATTGTTGCATGAATAACTCCTTTCAAACGATTGGAATAAAATCATAAATAGCATCATACCATATTA  >  USA300TCH1516_ALE/911301‑911445

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑