Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1123016	1123152	137	2 [1]	[1] 2	cfiB_1	2‑oxoglutarate carboxylase small subunit

ATCGCTATTGAAACAAATAAAAAAGTTACTTGTTGCTAACCGTGGAGAAATTGCAATTCGTATATTCAGAGCGGCGGCAGAATTAGACATCAGCACAGTTGCAATTTATTCGAATGAAGACAAAAGTTCATTACATAGATATAAAGCAGATGAATCCTATTTAGTTGGAAGTGATTTAGGT  >  USA300TCH1516_ALE/1122875‑1123055                                                                                                                                             |                                         aTCGCTATTGAAACAAATAAAAAAGTTACTTGTTGCTAACCGTCGAGAAATTGCAATTCGTATATTCAGAGCGGCGGCAGAATTAGACATCAGCACAGTTGCAATTTATTCGAATGAAGACAAAAGTTCATTACATAGata                                          <  1:51132/141‑1 (MQ=255)                                         cGTGGAGAAATTGCAATTCGTATATTCAGAGCGGCGGCAGAATTAGACATCAGCACAGTTGCAATTTATTCGAATGAAGACAAAAGTTCATTACATAGATATAAAGCAGATGAATCCTACTTAGTTGGAAGTGATTGAGGt  >  1:9288/1‑141 (MQ=255)                                                                                                                                             |                                         ATCGCTATTGAAACAAATAAAAAAGTTACTTGTTGCTAACCGTGGAGAAATTGCAATTCGTATATTCAGAGCGGCGGCAGAATTAGACATCAGCACAGTTGCAATTTATTCGAATGAAGACAAAAGTTCATTACATAGATATAAAGCAGATGAATCCTATTTAGTTGGAAGTGATTTAGGT  >  USA300TCH1516_ALE/1122875‑1123055

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑