Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1137080	1137201	122	2 [1]	[0] 2	isdB	Iron‑regulated surface determinant protein B

CTTTAACGATAGCATCATATAGAGTTTTACCTTCAACATATGGGAAAATAATTGTTCTAGTATTATTTTTAGCATCTTTGCTTATAGTTCTAACACGTTGACCTTCAACCATGAAATCTTTCCAGTAATCGTCATTAGTAGTTTCCATGACCATATATTTTTTGCCGTTAAGCATAC  >  USA300TCH1516_ALE/1136939‑1137115                                                                                                                                             |                                     cTTTAACGATAGCATCATATAGAGTTTTACCTTCAACATATGGGAAAATAATTGTTCTAGTATTATTTTTAGCATCTTTGCTTATAGTTCTAACACGTTGACCTTCAACCATGAAATCTTTCCAGTAATCGTCATtagtag                                      <  1:31887/141‑1 (MQ=255)                                     cATATGGGAAAATAATTGTTCTAGTATTATTTTTAGCATCTTTGCTTATAGTTCTAACACGTTGACCTTCAACCATGAAATCTTTCCAGTAATCGTCATTAGTAGTTTCCATGACCATATATTTTTTGCCGTTAAGCATAc  <  2:52373/141‑1 (MQ=255)                                                                                                                                             |                                     CTTTAACGATAGCATCATATAGAGTTTTACCTTCAACATATGGGAAAATAATTGTTCTAGTATTATTTTTAGCATCTTTGCTTATAGTTCTAACACGTTGACCTTCAACCATGAAATCTTTCCAGTAATCGTCATTAGTAGTTTCCATGACCATATATTTTTTGCCGTTAAGCATAC  >  USA300TCH1516_ALE/1136939‑1137115

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑