Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1356538	1356644	107	2 [1]	[1] 3	yclM	Aspartokinase 3

AGATAATTCACGCATTTCTCGATAAGTGATTTCTTCGATTAATTCAGGATCTTTGATGATATTTGGATTAGCTTTATAAATACCAGACACATCGGTGAAATTTTCATAAATTGTGGCTCTAACACCACTTGATATGATGGCGCCAGTTATATCTGATCCGCCACGTG  >  USA300TCH1516_ALE/1356397‑1356563                                                                                                                                             |                           aGATAATTCACGCATTTCTCGATAAGTGATTTCTTCGATTAATTCAGGATCTTTGATGATATTTGGATTAGCTTTATAAATACCAGACACATCGGTGAAATTTTCATAAATTGTGGCTCTAACACCACTTGATATGATGgc                            >  2:21905/1‑141 (MQ=255)                           tGATTTCTTCGATTAATTCAGGATCTTTGATGATATTTGGATTAGCTTTATAAATACCAGACACATCGGTGAAATTTTCATAAATTGTGGCTCTAACACCACTTGATATGATGGCGCCAGTTATATCTGATCCGCCACGTg  <  1:52758/141‑1 (MQ=255)                                                                                                                                             |                           AGATAATTCACGCATTTCTCGATAAGTGATTTCTTCGATTAATTCAGGATCTTTGATGATATTTGGATTAGCTTTATAAATACCAGACACATCGGTGAAATTTTCATAAATTGTGGCTCTAACACCACTTGATATGATGGCGCCAGTTATATCTGATCCGCCACGTG  >  USA300TCH1516_ALE/1356397‑1356563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑