Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ USA300TCH1516_ALE 1356538 1356644 107 2 [1] [1] 3 yclM Aspartokinase 3

ACTATATATCCTTCATGAGATACGCCAAAAAATCCTGGGATAATTAGTTTTTCATCATAATCTCTTAATTTTTTAATTTCAGAGTAAGCACTATCTAATATTTGTGCTTCTTGTGGGACGTCAGTAACAAAAATACCCGCTTCCTTCGGTGATATATATTTTGTTGGTATACCTTGACTATTATTATATAAAGCTATCAATTGCGCATTAAAAT  >  USA300TCH1516_ALE/1356572‑1356785
                                                                         |                                                                                                                                            
aCTATATATCCTTCATGAGATACGCCAAAAAATCCTGGGATAATTAGTTTTTCATCATAATCTCTTAATTTTTTAATTTCAGAGTAAGCACTATCTAATATTTGTGCTTCTTGTGGGACGTCAGTAACAAAAATACCCGct                                                                           <  1:21905/141‑1 (MQ=255)
                                                                         tAATTTCAGAGTAAGCACTATCTAATATTTGTGCTTCTTGTGGGACGTCAGTAACAAAAATACCCGCTTCCTTCGGTGATATATATTTTGTTGGTATACCTTGACTATTATTATATAAAGCTATCAATTGCGCATTAAAAt  >  1:20588/1‑141 (MQ=255)
                                                                         tAACTTCAGAGTAAGCACTATCTAATATTTGTGCTTCTTGTGGGACGTCAGTAACAAAAATACCCGCTTCCTTCGGTGATATATATTTTGTTGGTATACCTTGACTATTATTATATAAAGCTATCAATTGCGCATTAAAAt  <  2:8092/141‑1 (MQ=255)
                                                                         |                                                                                                                                            
ACTATATATCCTTCATGAGATACGCCAAAAAATCCTGGGATAATTAGTTTTTCATCATAATCTCTTAATTTTTTAATTTCAGAGTAAGCACTATCTAATATTTGTGCTTCTTGTGGGACGTCAGTAACAAAAATACCCGCTTCCTTCGGTGATATATATTTTGTTGGTATACCTTGACTATTATTATATAAAGCTATCAATTGCGCATTAAAAT  >  USA300TCH1516_ALE/1356572‑1356785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: