Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1428156	1428223	68	2 [1]	[1] 2	cvfB/ybiT	Conserved virulence factor B/putative ABC transporter ATP‑binding protein YbiT

ATCGTTCATTTCTGATTGGTTTAACTTTACGTTTTCACCGTTTGGTCCTTTTAAAAGGTAAGTTGAACCTTGTAACCCTACTACTTCAAGGAATTCTATAGAACCTACTATATCTTTGTCTAATGCCATGTTATTCTCCTTCGATTCTTGTATTCTTTATTATTATAACATGTGT  >  USA300TCH1516_ALE/1428015‑1428189                                                                                                                                             |                                   atcGTTCATTTCTGATTGGTTTAACTTTACGTTTTCACCGTTTGGTCCTTTTAAAAGGTAAGTTGAACCTTGTAACCCTACTACTTCAAGGAATTCTATAGAACCTACTATATCTTTGTCTAATGCCATGTTATTCTCCtt                                    <  1:35974/141‑1 (MQ=255)                                   tCACCGTTTGGTCCTTTTAAAAGGTAAGTTGAACCTTGTAACCCTACTACTTCAAGGAATTCTATAGAACCTACTATATCTTTGTCTAATGCCATGTTATTCTCCTTCGATTCTTGTATTCTTTATTATTATAACAtgtgt  >  1:43164/1‑141 (MQ=255)                                                                                                                                             |                                   ATCGTTCATTTCTGATTGGTTTAACTTTACGTTTTCACCGTTTGGTCCTTTTAAAAGGTAAGTTGAACCTTGTAACCCTACTACTTCAAGGAATTCTATAGAACCTACTATATCTTTGTCTAATGCCATGTTATTCTCCTTCGATTCTTGTATTCTTTATTATTATAACATGTGT  >  USA300TCH1516_ALE/1428015‑1428189

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑