Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1428156	1428223	68	2 [1]	[1] 2	cvfB/ybiT	Conserved virulence factor B/putative ABC transporter ATP‑binding protein YbiT

ATTCTATCATTACAACTTATATGAGGTCGAAACTGTGACGATAATATGATATAATTCTTCCGTTAGAATATCGAATGAAAAAAAGGAGAAAATGCATGTTACAAGTAACTGATGTGAGTTTACGTTTTGGAGATCGTAAACTATTTGAAGATGTAAATATTAAATTTACA  >  USA300TCH1516_ALE/1428195‑1428364                              |                                                                                                                                             aTTCTATCATTACAACTTATATGAGGTCGAAACTGTGACGATAATATGATATAATTCTTCCGTTAGAATATCGAATGAAAAAAAGGAGAAAATGCATGTTACAAGTAACTGATGTGAGTTTACGTTTTGGAGATCGTAAAc                               <  2:43164/141‑1 (MQ=255)                              aaaCTGTGACGATAATATGATATAATTCTTCCGTTAGAATAAAGAAAAAAAAAAAGGAGAAAATGCATGTTACAAGTAACTGATGTGAGTTTACGTTTTGGAGATCGTAAACTATTTGAAGATGTAAATATTAAATTTACa  <  2:18333/141‑1 (MQ=255)                              |                                                                                                                                             ATTCTATCATTACAACTTATATGAGGTCGAAACTGTGACGATAATATGATATAATTCTTCCGTTAGAATATCGAATGAAAAAAAGGAGAAAATGCATGTTACAAGTAACTGATGTGAGTTTACGTTTTGGAGATCGTAAACTATTTGAAGATGTAAATATTAAATTTACA  >  USA300TCH1516_ALE/1428195‑1428364

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑