Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ USA300TCH1516_ALE 1486225 1486274 50 2 [1] [1] 2 ebh_1 Extracellular matrix‑binding protein ebh

TTTGTTTTGTTTGTGTCTCATCATTGATACCATTTTGTAAACTATGCATTGCGTTATTTAATTCTGTTGCTTTTGCAGTTTCTTGATTTACACCAGCTACTGTTGTTGCACCATCAATGCTACGCGTTAACGCATCTTTTTGTGCATTGTTAATTGATG  >  USA300TCH1516_ALE/1486084‑1486242
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tttgttttgtTTGTGTCTCATCATTGATACCATTTTGTAAACTATGCATTGCGTTATTTAATTCTGTTGCTTTTGCAGTTTCTTGATTTACACCAGCTACTGTTGTTGCACCATCAATGCTACGCGTTAACGCATCttttt                    <  2:37818/141‑1 (MQ=255)
                  catcatTGATACCATTTTGTAAACTATGCATTGCGTTATTTAATTCTGTTGCTTTTGCAGTTTCTTGATTTACACCAGCTACTGTTGTTGCACCATCAATGCTACGCGTTAACGCATCTTTTTGTGCATTGTTAATTGATg  >  1:19572/1‑141 (MQ=255)
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TTTGTTTTGTTTGTGTCTCATCATTGATACCATTTTGTAAACTATGCATTGCGTTATTTAATTCTGTTGCTTTTGCAGTTTCTTGATTTACACCAGCTACTGTTGTTGCACCATCAATGCTACGCGTTAACGCATCTTTTTGTGCATTGTTAATTGATG  >  USA300TCH1516_ALE/1486084‑1486242

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: