Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1486628	1486663	36	2 [1]	[1] 2	ebh_1	Extracellular matrix‑binding protein ebh

AATACTATCTCTTAAGCCTTTCATCGCTGTATTCAACGTTTGAGAACTATTTTTAACAGTTTGAACACCATCTAATGTAGTTGCACTTTGAACTTGTTCTTTTAATTTTGCTTTTTGTGCATTATTCAATTGTGCTAAGCCGTCAAT  >  USA300TCH1516_ALE/1486487‑1486633                                                                                                                                             |       aaTACTATCTCTTAAGCCTTTCATCGCTGTATTCAACGTTTGAGAACTATTTTTAACAGTTTGAACACCATCTAATGTAGTTGCACTTTGAACTTGTTCTTTTAATTTTGCTTTTTGTGCATTATTCAATTGTGCTAAGcc        <  1:45011/141‑1 (MQ=255)       aTCTCTTAAGCCTTTCATCGCTGTATTCAACGTTTGAGAACTATTTTTAACAGTTTGAACACCATCTAATGTAGTTGCACTTTGAACTTGTTCTTTTAATTTTGCTTTTTGTGCATTATTCAATTGTGCTAAGCCGTCAat  >  2:20003/1‑141 (MQ=255)                                                                                                                                             |       AATACTATCTCTTAAGCCTTTCATCGCTGTATTCAACGTTTGAGAACTATTTTTAACAGTTTGAACACCATCTAATGTAGTTGCACTTTGAACTTGTTCTTTTAATTTTGCTTTTTGTGCATTATTCAATTGTGCTAAGCCGTCAAT  >  USA300TCH1516_ALE/1486487‑1486633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑