Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1486628	1486663	36	2 [1]	[1] 2	ebh_1	Extracellular matrix‑binding protein ebh

CGCTACACGTAAGTTGTTATCACCATTTAATGCTGTTTTAGCCGCATTGACTTGTGATGCCGCACTATTTACGTCATTGACTGTTAATGTCGCATTCGGTGTACCACTAATGATATTTTCAGCGTTAGTCACTTTTGAATCATACGCTTG  >  USA300TCH1516_ALE/1486655‑1486804          |                                                                                                                                             cGCTACACGTAAGTTGTTATCACCATTTAATGCTGTTTTAGCCGCATTGACTTGTGATGCCGCACTATTTACGTCATTGACTGTTAATGTCGCATTCGGTGTACCACTAATGATATTTTCAGCGTTAGTCACTTTTGAATc           <  1:20003/141‑1 (MQ=255)          tAAGTTGTTATCACCATTTAATGCTGTTTTAGCCGCATTGACTTGTGATGCCGCACTATTTACGTCATTGACTGTTAATGTCGCATTCGGTGTACCACTAATGATATTTTCAGCGTTAGTCACTTTTGAATCATACGCTTg  <  1:3321/141‑1 (MQ=255)          |                                                                                                                                             CGCTACACGTAAGTTGTTATCACCATTTAATGCTGTTTTAGCCGCATTGACTTGTGATGCCGCACTATTTACGTCATTGACTGTTAATGTCGCATTCGGTGTACCACTAATGATATTTTCAGCGTTAGTCACTTTTGAATCATACGCTTG  >  USA300TCH1516_ALE/1486655‑1486804

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑