Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1636558	1636712	155	2 [1]	[1] 2	USA300HOU_RS08115	Dihydrolipoyl dehydrogenase

TTAAATGCTTTACACCTTGATACATTTGATTAATAATGTCTTCTTTTCGTGCCAACATATTTTCAAAATTAACATTAGCATCTTTGACATCAACGCCAAACATTGCTGCCTGTTTTACTGTTTGAAATACTTCAGCAGATTTAAGCA  >  USA300TCH1516_ALE/1636417‑1636563                                                                                                                                             |       ttAAATGCTTTACACCTTGATACATTTGATTAATAATGTCTTCTTTTCGTGCCAACATATTTTCAAAATTAACATTAGCATCTTTGACATCAACGCCAAACATTGCTGCCTGTTTTACTGTTTGAAATACTTCAGCAGAtt        <  1:56734/141‑1 (MQ=255)       gCTTTACACCTTGATACATTTGATTAATAATGTCTTCTTTTCGTGCCAACATATTTTCAAAATTAACATTAGCATCTTTGACATCAACGCCAAACATTGCTGCCTGTTTTACTGTTTGAAATACTTCAGCAGATTTAagca  <  1:39029/141‑1 (MQ=255)                                                                                                                                             |       TTAAATGCTTTACACCTTGATACATTTGATTAATAATGTCTTCTTTTCGTGCCAACATATTTTCAAAATTAACATTAGCATCTTTGACATCAACGCCAAACATTGCTGCCTGTTTTACTGTTTGAAATACTTCAGCAGATTTAAGCA  >  USA300TCH1516_ALE/1636417‑1636563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑