Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1636558	1636712	155	2 [1]	[1] 2	USA300HOU_RS08115	Dihydrolipoyl dehydrogenase

GTATCGCAGCAACATATCCTGCAGTACCTCCACCGAGAACGACTAAATCATATTGTTTCTCTGACATGTTCTTACTCCTAACTAATGATATATATCCATTGAAAATTTATTAATACATAGTTTTCATGTCCATTAATTACCTATTTTACATGATTGTCTATTTAGTTTGAATGCACATAAATAAATCCATAAATGAG  >  USA300TCH1516_ALE/1636657‑1636853                                                         |                                                                                                                                             gTATCGCAGCAACATATCCTGCAGTACCTCCACCGAGAACGACTAAATCATATTGTTTCTCTGACATGTTCTTACTCCTAACTAATGATATATATCCATTGAAAATTTATTAATACATAGTTTTCATGTCCATTAATTAcc                                                          >  1:33972/1‑141 (MQ=255)                                                         ttCTCTGACATGTTCTTACTCCTAACTAATGATATATATCCATTGAAAATTTATTAATACATAGTTTTCATGTCCATTAATTACCTATTTTACATGATTGTCTATTTAGTTTGAATGCACATAAATAAATCCATAAATGAg  <  2:33972/141‑1 (MQ=255)                                                         |                                                                                                                                             GTATCGCAGCAACATATCCTGCAGTACCTCCACCGAGAACGACTAAATCATATTGTTTCTCTGACATGTTCTTACTCCTAACTAATGATATATATCCATTGAAAATTTATTAATACATAGTTTTCATGTCCATTAATTACCTATTTTACATGATTGTCTATTTAGTTTGAATGCACATAAATAAATCCATAAATGAG  >  USA300TCH1516_ALE/1636657‑1636853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑