Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1686541	1686674	134	2 [1]	[1] 2	mtaB	Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB

ATCTTTTAAATCTTGACCATATCCACCTGTATGAATTCCCGTCAATACAATTTCCTTATATCCTGAATTCACTAGTTGCGTCGCTTGTTCAACTACTTTTTCCGGATCTCTTGAACGCATTAAGCCACGAGCCCATGGAATAATACAGAATGTGCAGAAGTTGTTACAACCTTCTTGAATTTTTAATGACGCACGTGTTCTATCTGTAA  >  USA300TCH1516_ALE/1686400‑1686608                                                                                                                                             |                                                                     aTCTTTTAAATCTTGACCATATCCACCTGTATGAATTCCCGTCAATACAATTTCCTTATATCCTGAATTCACTAGTTGCGTCGCTTGTTCAACTACTTTTTCCGGATCTCTTGAACGCATTAAGCCACGAGCCCATGGaat                                                                      <  1:10512/141‑1 (MQ=255)                                                                     tCACTAGTTGCGTCGCTTGTTCAACTACTTTTTCCGGATCTCTTGAACGCATTAAGCCACGAGCCCATGGAATAATACAGAATGTGCAGAAGTTGTTACAACCTTCTTGAATTTTTAATGACGCACGTGTTCTATCTGTaa  <  1:36430/141‑1 (MQ=255)                                                                                                                                             |                                                                     ATCTTTTAAATCTTGACCATATCCACCTGTATGAATTCCCGTCAATACAATTTCCTTATATCCTGAATTCACTAGTTGCGTCGCTTGTTCAACTACTTTTTCCGGATCTCTTGAACGCATTAAGCCACGAGCCCATGGAATAATACAGAATGTGCAGAAGTTGTTACAACCTTCTTGAATTTTTAATGACGCACGTGTTCTATCTGTAA  >  USA300TCH1516_ALE/1686400‑1686608

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑