Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ USA300TCH1516_ALE 1693599 1693671 73 2 [1] [1] 2 [hemN_1] [hemN_1]

TTAGAACCAACGGGTTGTCCAAAATCAACATAATCCTCAACAATTGCGTTTAATATACTCAATTGCCTATCTGTAATCATGTTTTCACCTCATTAGCACTCACTTATCTCAAGTGCTAATTATAATTTATCAAATTGGTCAAAGTAAGTCAATGTTAAAGAC  >  USA300TCH1516_ALE/1693458‑1693619
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ttAGAACCAACGGGTTGTCCAAAATCAACATAATCCTCAACAATTGCGTTTAATATACTCAATTGCCTATCTGTAATCATGTTTTCACCTCATTAGCACTCACTTATCTCAAGTGCTAATTATAATTTATCAAATTGGTCa                       <  1:12364/141‑1 (MQ=255)
                     aaaTCAACATAATCCTCAACAATTGCGTTTAATATCCTCCACTGCCTATCTGTCATCATCTTTCCTCCTCATTAGCAATCACTTATCTCAAGTGCTAATTATAATTTATCAAATTGGTCAAAGTAAGTCAATGTTAAAGAc  <  1:54938/141‑1 (MQ=255)
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TTAGAACCAACGGGTTGTCCAAAATCAACATAATCCTCAACAATTGCGTTTAATATACTCAATTGCCTATCTGTAATCATGTTTTCACCTCATTAGCACTCACTTATCTCAAGTGCTAATTATAATTTATCAAATTGGTCAAAGTAAGTCAATGTTAAAGAC  >  USA300TCH1516_ALE/1693458‑1693619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: