Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1693599	1693671	73	2 [1]	[1] 2	[hemN_1]	[hemN_1]

AAACCTCATTACCTATGACTTTCCCTCTATTTGTAAGTGCAATCACATCGTTCTTTTCTACAATTAATTCCTTCTCTTTTAAATTATTTATTGTTTGACCAAAGACACTTTCAATAGATTGGTCAAACTTCTTTTTGAACCTACTACTAC  >  USA300TCH1516_ALE/1693663‑1693812          |                                                                                                                                             aaaCCTCATTACCTATGACTTTCCCTCTATTTGTAAGTGCAATCACATCGTTCTTTTCTACAATTAATTCCTTCTCTTTTAAATTATTTATTGTTTGACCAAAGACACTTTCAATAGATTGGTCAAACTTCTTTTTGAAcc           <  2:45269/141‑1 (MQ=255)          tACCTATGACTTTCCCTCTATTTGTAAGTGCAATCACATCGTTCTTTTCTACAATTAATTCCTTCTCTTTTAAATTATTTATTGTTTGACCAAAGACACTTTCAATAGATTGGTCAAACTTCTTTTTGAACCtactactac  >  1:2763/1‑141 (MQ=255)          |                                                                                                                                             AAACCTCATTACCTATGACTTTCCCTCTATTTGTAAGTGCAATCACATCGTTCTTTTCTACAATTAATTCCTTCTCTTTTAAATTATTTATTGTTTGACCAAAGACACTTTCAATAGATTGGTCAAACTTCTTTTTGAACCTACTACTAC  >  USA300TCH1516_ALE/1693663‑1693812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑