Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1738464	1738704	241	2 [1]	[1] 2	[hisS]	[hisS]

CAATTCCTTCTCTATCTCTTAAATCAACGAAAATCAATCCACCAAGGTCACGACGATTGTTAACCCATCCTTTTAATGTAATTTCTTGTCCTAAAAATGCCTCAGTAACTAATCCACAATAAGTTGTTCTCTTACTCATATTTTAACGCCCTCTCTACTTCTTAAAATATTCGACTAATGCGTCTAATTCAATTGTTTCAGATTCACCAGTTGTCATATTTTT  >  USA300TCH1516_ALE/1738323‑1738545                                                                                                                                             |                                                                                   cAATTCCTTCTCTATCTCTTAAATCAACGAAAATCAATCCACCAAGGTCACGACGATTGTTAACCCATCCTTTTAATGTAATTTCTTGTCCTAAAAATGCCTCAGTAACTAATCCACAATAAGTTGTTCTCTTACTCatat                                                                                    <  1:8554/141‑1 (MQ=255)                                                                                   ttCTTGTCCTAAAAATGCCTCAGTAACTAATCCACAATAAGTTGTTCTCTTACTCATATTTTAACGCCCTCTCTACTTCTTAAAATATTCGACTAATGCGTCTAATTCAATTGTTTCAGATTCACCAGTTGTCATAttttt  <  1:62309/141‑1 (MQ=255)                                                                                                                                             |                                                                                   CAATTCCTTCTCTATCTCTTAAATCAACGAAAATCAATCCACCAAGGTCACGACGATTGTTAACCCATCCTTTTAATGTAATTTCTTGTCCTAAAAATGCCTCAGTAACTAATCCACAATAAGTTGTTCTCTTACTCATATTTTAACGCCCTCTCTACTTCTTAAAATATTCGACTAATGCGTCTAATTCAATTGTTTCAGATTCACCAGTTGTCATATTTTT  >  USA300TCH1516_ALE/1738323‑1738545

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑