Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1876292	1876489	198	2 [1]	[1] 2	murJ_2	Lipid II flippase MurJ

ATATCTGTGTAATCAGATTCGACCATACGATCAATATTATGCTTACGCTTTCTCCAGTAATACCAGAGTGTGAATATACCAATAATCGCACCAACTGCTGCTGCAAAAGTAGCAATACCATTGGCTAATAAAATAGAGCCATCAAAGACATTTAGTACTAAATAACTT  >  USA300TCH1516_ALE/1876151‑1876318                                                                                                                                             |                            atatCTGTGTAACCAGATTCGACCATACGAGCAATATTATGCTTACGCTTTCTCCAGTAATACCAGAGTGTGAATATACCAATAATCGCACCAACTGCTGCTGCAAAAGTAGCAATACCATTGGCTAATAAAATAGAGCCa                             <  1:18791/141‑1 (MQ=255)                            cGATCAATATTATGCTTACGCTTTCTCCAGTAATACCAGAGTGTGAATATACCAATAATCGCACCAACTGCTGCTGCAAAAGTAGCAATACCATTGGCTAATAAAATAGAGCCATCAAAGACATTTAGTACTAAATAACtt  <  2:1402/141‑1 (MQ=255)                                                                                                                                             |                            ATATCTGTGTAATCAGATTCGACCATACGATCAATATTATGCTTACGCTTTCTCCAGTAATACCAGAGTGTGAATATACCAATAATCGCACCAACTGCTGCTGCAAAAGTAGCAATACCATTGGCTAATAAAATAGAGCCATCAAAGACATTTAGTACTAAATAACTT  >  USA300TCH1516_ALE/1876151‑1876318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑