Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1876292	1876489	198	2 [1]	[1] 2	murJ_2	Lipid II flippase MurJ

CTTGGAATATCCCTCTCCATGTCGCTAATACAGGAATAAAGATAACAACCATACTAATGATTCTTATAATCCAAGTAATATCATCGACTGACCAACCGTTTTTATCATGAATGTTTCTAGCTAATGTTAATTCAGAAATATAAGGTGCTAAGAAATACAGTACCAAGAAACCTAAAACACCGGTAATACTCATTACAATAAAACTCGATTTATAAAATTTCTGACTTACTTTATAT  >  USA300TCH1516_ALE/1876395‑1876630                                                                                                |                                                                                                                                             cTTGGAATATCCCTCTCCATGTCGCTAATACAGGAATAAAGATAACAACCATACTAATGATTCTTATAATCCAAGTAATATCATCGACTGACCAACCGTTTTTATCATGAATGTTTCTAGCTAATGTTAATTCAGAAatat                                                                                                 >  2:35124/1‑141 (MQ=255)                                                                                                ccGTTTTTATCATGAATGTTTCTAGCTAATGTTAATTCAGAAATATAAGGTGCTAAGAAATACAGTACCAAGAAACCTAAAACACCGGTAATACTCATTACAATAAAACTCGATTTATAAAATTTCTGACTTACTTTatat  >  1:59170/1‑141 (MQ=255)                                                                                                |                                                                                                                                             CTTGGAATATCCCTCTCCATGTCGCTAATACAGGAATAAAGATAACAACCATACTAATGATTCTTATAATCCAAGTAATATCATCGACTGACCAACCGTTTTTATCATGAATGTTTCTAGCTAATGTTAATTCAGAAATATAAGGTGCTAAGAAATACAGTACCAAGAAACCTAAAACACCGGTAATACTCATTACAATAAAACTCGATTTATAAAATTTCTGACTTACTTTATAT  >  USA300TCH1516_ALE/1876395‑1876630

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑