Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1889376	1889450	75	2 [1]	[1] 2	mdtH	Multidrug resistance protein MdtH

TTACCGCGACAAGCGCAAACACAACATACATAATAAGATTGGCTAAAAAGATATAGTTAAAGCTAAATTCTGCGACAAAGCCGCCCATTGCAGCACCGACAGCCACACCAATATTTTGCGCTAAGTATATCGCATTAAACGTTTGTCTTCCGCCATTTGGCCACACTGC  >  USA300TCH1516_ALE/1889235‑1889403                                                                                                                                             |                             ttACCGCGACAAGCGCAAACACAACATACATAATAAGATTGGCTAAAAAGATATAGTTAAAGCTAAATTCTGCGACAAAGCCGCCCATTGCAGCACCGACAGCCACACCAATATTTTGCGCTAAGTATATCGCATTAAACg                              <  2:39202/141‑1 (MQ=255)                             cataATAAGATTGGCTAAAAAGATATAGTTAAAGCTAAATTCTGCGACAAAGCCGCCCATTGCAGCACCGACAGCCACACCAATATTTTGCGCTAAGTATATCGCATTAAACGTTTGTCTTCCGCCATTTGGCCACACTGc  >  1:13757/1‑141 (MQ=255)                                                                                                                                             |                             TTACCGCGACAAGCGCAAACACAACATACATAATAAGATTGGCTAAAAAGATATAGTTAAAGCTAAATTCTGCGACAAAGCCGCCCATTGCAGCACCGACAGCCACACCAATATTTTGCGCTAAGTATATCGCATTAAACGTTTGTCTTCCGCCATTTGGCCACACTGC  >  USA300TCH1516_ALE/1889235‑1889403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑