Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1892499	1892554	56	2 [1]	[1] 2	USA300TCH1516_01749	hypothetical protein

ATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTTTCAACCTTAAAAAAGTTCTAAAAAAAGATGAGCATCTACTGTCTCATCTTTCAGTTCTTTTTTACGGGTCTGTTTTCTAATTTGAGCACAATCTTCGATTTCT  >  USA300TCH1516_ALE/1892358‑1892523                                                                                                                                             |                          atGATTTGTATAAAACAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTTTCAACCTTAAAAAAAAAAAAAAAAAAGATGAGCATCTACTGTCTCATCTTTCAGTTCTTTTTTACGGGTCTGTTTTCt                           <  2:42383/141‑1 (MQ=255)                          cTTACAAATCAAATGTGTATAAAATGTGATATACATTTTCAACCTTAAAAAAGTTCTAAAAAAAGATGAGCATCTACTGTCTCGTCTTTCAGTTATTTTTTACGGGTCTGTTTTCTAATTTGATCACAATCTTCTATTTCt  >  1:5898/1‑141 (MQ=255)                                                                                                                                             |                          ATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTTTCAACCTTAAAAAAGTTCTAAAAAAAGATGAGCATCTACTGTCTCATCTTTCAGTTCTTTTTTACGGGTCTGTTTTCTAATTTGAGCACAATCTTCGATTTCT  >  USA300TCH1516_ALE/1892358‑1892523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑