Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	2557742	2557771	30	2 [0]	[1] 2	[mapZ]	[mapZ]

TTCACCTAGCACTTTAGAAGATGTCCTACAAAATAGCGAACAAAATTTATTAAACACTGCAACTGACATTGCTCGTATTCTGAAATTACAATAATGTCAAAGTAAATCATCAGCTTTATTATTTGCAGTTAAAACTTGAAT  >  USA300TCH1516_ALE/2557601‑2557741                                                                                                                                             | ttCACCTAGCACTTTAGAAGATGTCCTACAAAATAGCGAACAAAATTTATTAAACACTGCAACTGACATTGCTCGTATTCTGAAATTACAATAATGTCAAAGTAAATCATCAGCTTTATTATTTGCAGTTAAAACTTGAAt  >  1:10279/1‑141 (MQ=255) ttCACCTAGCACTTTAGAAGATGTCCTACAAAATAGCGAACAAAATTTATTAAACACTGCAACTGACATTGCTCGTATTCTGAAATTACAATAATGTCAAAGTAAATCATCAGCTTTATTATTTGCAGTTAAAACTTGAAt  <  1:31823/141‑1 (MQ=255)                                                                                                                                             | TTCACCTAGCACTTTAGAAGATGTCCTACAAAATAGCGAACAAAATTTATTAAACACTGCAACTGACATTGCTCGTATTCTGAAATTACAATAATGTCAAAGTAAATCATCAGCTTTATTATTTGCAGTTAAAACTTGAAT  >  USA300TCH1516_ALE/2557601‑2557741

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑