Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	400658	400715	58	2 [1]	[1] 2	tatAy	Sec‑independent protein translocase protein TatAy

TTGTTTCGATTCCTTACTGGGTGTATCGTGAGACTCTTTATCTAAATCTTCTGTTGCAGATTTAAATTCTTTTAAAGTAGAACCGATGGCACGGCCAAATTGTGGTAATTTTTTCGGACCAAAAATAATTAAAGCGATAATGCTAATGACGACAAGACTTGTTGGGCCTGTGATGCCT  >  USA300TCH1516_ALE/400517‑400694                                                                                                                                             |                                      ttgttTCGATTCCTTACTGGGTGTATCGTGAGACTCTTTATCTAAATCTTCTGTTGCAGATTTAAATTCTTTTAAAGTAGAACCGATGGCACGGCCAAATTGTGGTAATTTTTTCGGACCAAAAATAATTAAAGCGATAAt                                       <  1:43699/141‑1 (MQ=255)                                      ttATCTAAATCTTCTGTTGCAGATTTAAATTCTTTTAAAGTAGAACCGATGGCACGGCCAAATTGTGGTAATTTTTTCGGACCAAAAATAATTAAAGCGATAATGCTAATGACGACAAGACTTGTTGGGCCTGTGATGCCt  <  1:50473/141‑1 (MQ=255)                                                                                                                                             |                                      TTGTTTCGATTCCTTACTGGGTGTATCGTGAGACTCTTTATCTAAATCTTCTGTTGCAGATTTAAATTCTTTTAAAGTAGAACCGATGGCACGGCCAAATTGTGGTAATTTTTTCGGACCAAAAATAATTAAAGCGATAATGCTAATGACGACAAGACTTGTTGGGCCTGTGATGCCT  >  USA300TCH1516_ALE/400517‑400694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑