Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	400658	400715	58	2 [1]	[1] 2	tatAy	Sec‑independent protein translocase protein TatAy

AAGTGTTAGTTATCATGATAATCAACCTCACTCATAAGTAGTATATAGTATTTACTTTATACCGAACGATAATGATTATCAATAAAATTTTATGAAATAATTAAAATGTTGCTATAAATATAGTTTATTGAGGGATTAATTCTGAAATAACAGCT  >  USA300TCH1516_ALE/400702‑400856               |                                                                                                                                             aaGTGTTAGTTATCATGATAATCAACCTCACTCATAAGTAGTATATAGTATTTACTTTATACCGAACGATAATGATTATCAATAAAATTTTATGAAATAATTAAAATGTTGCTATAAATATAGTTTATTGAGGGATTAAtt                <  2:4251/141‑1 (MQ=255)               aTGATAATCAACCTCACTCATAAGTAGTATATAGTATTTACTTTATACCGAACGATAATGATTATCAATAAAATTTTATGAAATAATTAAAATGTTGCTATAAATATAGTTTATTGAGGGATTAATTCTGAAATAACAGCt  >  2:34853/1‑141 (MQ=255)               |                                                                                                                                             AAGTGTTAGTTATCATGATAATCAACCTCACTCATAAGTAGTATATAGTATTTACTTTATACCGAACGATAATGATTATCAATAAAATTTTATGAAATAATTAAAATGTTGCTATAAATATAGTTTATTGAGGGATTAATTCTGAAATAACAGCT  >  USA300TCH1516_ALE/400702‑400856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑