Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	844619	844755	137	2 [1]	[1] 2	lgt	Prolipoprotein diacylglyceryl transferase

ATATGTATATTAACGGCCAATATTATCATCCAACATTCTTATATGAATCCATTTGGGATGTCGCTGGATTTATTATCTTAGTTAATATTCGTAAACATTTAAAATTAGGAGAAACATTCTTTTTATATTTAACTTGGTATTCAATTGGTCGATTCTTTATAGAAGGATTACGTACAGATAG  >  USA300TCH1516_ALE/844716‑844896                                         |                                                                                                                                             atatGTATATTAACGGCCAATATTATCATCCAACATTCTTATATGAATCCATTTGGGATGTCGCTGGATTTATTATCTTAGTTAATATTCGTAAACATTTAAAATTAGGAGAAACATTCTTTTTATATTTAACTTGGTAtt                                          >  1:63600/1‑141 (MQ=255)                                         atatGAATCCATTTGGGATGTCGCTGGATTTATTATCTTAGTTAATATTCGTAAACATTTAAAATTAGGAGAAACATTCTTTTTATATTTAACTTGGTATTCAATTGGTCGATTCTTTATAGAAGGATTACGTACAGATAg  >  2:13842/1‑141 (MQ=255)                                         |                                                                                                                                             ATATGTATATTAACGGCCAATATTATCATCCAACATTCTTATATGAATCCATTTGGGATGTCGCTGGATTTATTATCTTAGTTAATATTCGTAAACATTTAAAATTAGGAGAAACATTCTTTTTATATTTAACTTGGTATTCAATTGGTCGATTCTTTATAGAAGGATTACGTACAGATAG  >  USA300TCH1516_ALE/844716‑844896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑