Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1012746	1012837	92	2 [1]	[1] 2	gerN	Na(+)/H(+)‑K(+) antiporter GerN

CAGATGAAGAAATGGTTGAAAAGTTAGACTCATTTGGTTATGGGTTCTTTATTCCTATTTTCTTTATAATGGTTGGTGTAGATTTAAACATACCTTCATTAATTAAAGAACCGAAATTACTAATTATCATACCGATTTTAATCGTTGCATTTATCATTTCAAAATTAATTCCAGTCATGTTTATTCG  >  USA300TCH1516_ALE/1012792‑1012978                                               |                                                                                                                                             cAGATGAAGAAATGGTTGAAAAGTTAGACTCATTTGGTTATGGGTTCTTTATTCCTATTTTCTTTATAATGGTTGGTGTAGATTTAAACATACCTTCATTAATTAAAGAACCGAAATTACTAATTATCATACCGATTTTaa                                                >  2:49317/1‑141 (MQ=255)                                               cTTTATTTCTATTTTCTTTATAATGGTTGGTGTAGATTTAAACATACCTTCATTAATTAAAGAACCGAAATTACTAATTATCATACCGATTTTAATCGTTGCATTTATCATTTCAAAATTAATTCCAGTCATGTTTATTCg  >  2:8503/1‑141 (MQ=255)                                               |                                                                                                                                             CAGATGAAGAAATGGTTGAAAAGTTAGACTCATTTGGTTATGGGTTCTTTATTCCTATTTTCTTTATAATGGTTGGTGTAGATTTAAACATACCTTCATTAATTAAAGAACCGAAATTACTAATTATCATACCGATTTTAATCGTTGCATTTATCATTTCAAAATTAATTCCAGTCATGTTTATTCG  >  USA300TCH1516_ALE/1012792‑1012978

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑