Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1103292	1103322	31	2 [1]	[1] 2	pdhA	Pyruvate dehydrogenase E1 component subunit alpha

GTGACGATCCAACTCGTTACAGAACTTCAGACGAAGATGCTGAATGGGAGAAAAAAGACCCATTAGTACGTTTCCGTAAATTCCTTGAAAACAAAGGTTTATGGAATGAAGACAAAGAAAATGAAGTTATTGAACGTGCAAAAGCTGATATTAAAG  >  USA300TCH1516_ALE/1103308‑1103463                |                                                                                                                                             gTGACGATCCAACTCGTTACAGAACTTCAGACGAAGATGCTGAATGGGAGAAAAAAGACCCATTAGTACGTTTCCGTAAATTCCTTGAAAACAAAGGTTTATGGAATGAAGACAAAGAAAATGAAGTTATTGAACGTGCaa                 >  1:7633/1‑141 (MQ=255)                gTTACAGAACTTCAGACGAAGATGCTGAATGGGAGAAAAAAGACCCATTAGTACGTTTCCGTAAATTCCTTGAAAACAAAGGTTTATGGAATGAAGACAAAGAAAATGAAGTTATTGAACGTGCAAAAGCTGATATTAAag  >  1:46829/1‑141 (MQ=255)                |                                                                                                                                             GTGACGATCCAACTCGTTACAGAACTTCAGACGAAGATGCTGAATGGGAGAAAAAAGACCCATTAGTACGTTTCCGTAAATTCCTTGAAAACAAAGGTTTATGGAATGAAGACAAAGAAAATGAAGTTATTGAACGTGCAAAAGCTGATATTAAAG  >  USA300TCH1516_ALE/1103308‑1103463

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑