Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1114592	1114634	43	2 [1]	[1] 2	mntH_1	Divalent metal cation transporter MntH

ATCATAGAAACCACCTAAATCGTCAGCATTTGAGTTGAAAAATAGTGATGCTCCTAACACTAATAATAAGCAATTGACTACAAATGCGATTGATAACTGAATGTTCGAATCTATCGTAGCAAATTTAATCGCTTGCGCTTTTTCTTCATTGTTATGTC  >  USA300TCH1516_ALE/1114618‑1114775                  |                                                                                                                                             aTCATAGAAACCACCTAAATCGTCAGCATTTGAGTTGAAAAATAGTGATGCTCCTAACACTAATAATAAGCAATTGACTACAAATGCGATTGATAACTGAATGTTCGAATCTATCGTAGCAAATTTAATCGCTTGCGCttt                   <  1:52859/141‑1 (MQ=255)                  aaTCGTCAGCATTTGAGTTGAAAAATAGTGATGCTCCTAACACTAATAATAAGCAATTGACTACAAATGCGATTGATAACTGAATGTTCGAATCTATCGTAGCAAATTTAATCGCTTGCGCTTTTTCTTCATTGTTATGTc  >  2:3046/1‑141 (MQ=255)                  |                                                                                                                                             ATCATAGAAACCACCTAAATCGTCAGCATTTGAGTTGAAAAATAGTGATGCTCCTAACACTAATAATAAGCAATTGACTACAAATGCGATTGATAACTGAATGTTCGAATCTATCGTAGCAAATTTAATCGCTTGCGCTTTTTCTTCATTGTTATGTC  >  USA300TCH1516_ALE/1114618‑1114775

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑