Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1627440	1627485	46	2 [1]	[1] 2	gnd	6‑phosphogluconate dehydrogenase, decarboxylating

AAGAACAAATTTTACTCATATATAATGCTTTACGAATTTTTTCTAAAAAGTCTTTCTTGTCACCATCAAATGATGCTTTTGGACCATTTAATTCTTTAGAAGCATTTACGCGCTCTTCTTTGATTGAAGAGATAAAACGTGCAAATAC  >  USA300TCH1516_ALE/1627479‑1627626        |                                                                                                                                             aaGAACAAATTTTACTCATATATAATGCTTTACGAATTTTCTCTAAAAAGGCTTTCTTGTCACCATCAAATGATGCTTTTGGACCATTTAATTCTTTAGAAGCATTTACGCGCTCTTCTTTGATTGAAGAGATAAAACGTg         <  1:58062/141‑1 (MQ=255)        aaTTTTACTCATATATAATGCTTTACGAATTTTTTTTTTTTTTTCTTTCTTGAAACCATCAAATGATGCTTTTGTTCTATTTAATTTTTTAGAAGCATTTACCCTCTCTTCTTTGATTGAAGAGATAAAACGTTCAAATat  >  2:25941/1‑140 (MQ=255)        |                                                                                                                                             AAGAACAAATTTTACTCATATATAATGCTTTACGAATTTTTTCTAAAAAGTCTTTCTTGTCACCATCAAATGATGCTTTTGGACCATTTAATTCTTTAGAAGCATTTACGCGCTCTTCTTTGATTGAAGAGATAAAACGTGCAAATAC  >  USA300TCH1516_ALE/1627479‑1627626

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑